Gene : Glyma.05G010900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR19877 - WD40 REPEAT PROTEIN Genomic Order:  109
Name:  ? Glyma.05G010900 Secondary Identifier:  ? PAC:30527523
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G010900 0.5kb upstream 0.5kb upstream 7017 true Chr05: 950691-957707 Glycine max
Glyma.05G010900 0.5kb upstream 0.5kb upstream 500 false Chr05: 950691-951190 Glycine max
Glyma.05G010900 0.5kb downstream 0.5kb downstream 7017 true Chr05: 951191-958207 Glycine max
Glyma.05G010900 0.5kb downstream 0.5kb downstream 500 false Chr05: 957708-958207 Glycine max
Glyma.05G010900 1.0kb upstream 1.0kb upstream 7517 true Chr05: 950191-957707 Glycine max
Glyma.05G010900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 950191-951190 Glycine max
Glyma.05G010900 1.0kb downstream 1.0kb downstream 7517 true Chr05: 951191-958707 Glycine max
Glyma.05G010900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 957708-958707 Glycine max
Glyma.05G010900 2.0kb upstream 2.0kb upstream 8517 true Chr05: 949191-957707 Glycine max
Glyma.05G010900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 949191-951190 Glycine max
Glyma.05G010900 2.0kb downstream 2.0kb downstream 8517 true Chr05: 951191-959707 Glycine max
Glyma.05G010900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 957708-959707 Glycine max
Glyma.05G010900 5.0kb upstream 5.0kb upstream 11517 true Chr05: 946191-957707 Glycine max
Glyma.05G010900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 946191-951190 Glycine max
Glyma.05G010900 5.0kb downstream 5.0kb downstream 11517 true Chr05: 951191-962707 Glycine max
Glyma.05G010900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 957708-962707 Glycine max
Glyma.05G010900 10.0kb upstream 10.0kb upstream 16517 true Chr05: 941191-957707 Glycine max
Glyma.05G010900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 941191-951190 Glycine max
Glyma.05G010900 10.0kb downstream 10.0kb downstream 16517 true Chr05: 951191-967707 Glycine max
Glyma.05G010900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 957708-967707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307997 5265 Fabidae View MSA
124065489 5270 Rosid View MSA
123747491 5271 Pentapetalae View MSA
122789179 5272 Eudicot View MSA
122051030 5273 Angiosperm View MSA
121344800 5274 Embryophyte View MSA
123428102 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.8678 0.0 58.5382    
cufflinks 16.9604 0.0 45.2484   Low
cufflinks 20.3291 0.0 54.378 High  
cufflinks 21.4131 0.0 57.2977 High  
cufflinks 22.4481 0.0 60.1239 High  
cufflinks 18.0249 0.0 48.1002   Low
cufflinks 18.9863 0.0 50.6805    
cufflinks 24.5428 0.0 65.9747 High High
cufflinks 20.8513 0.0 55.7669 High  
cufflinks 6.601        
cufflinks 7.618     High  
cufflinks 7.086        
cufflinks 7.679     High  
cufflinks 8.512     High High
cufflinks 5.022       Low
cufflinks 5.365        
cufflinks 5.288        
cufflinks 7.983     High High
cufflinks 8.636     High High
cufflinks 6.879     High  
cufflinks 6.058     High  
cufflinks 6.076        
cufflinks 4.944       Low
cufflinks 7.689     High  
cufflinks 5.953        
cufflinks 4.063       Low

0 Strain