Gene : Glyma.05G011300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22891//PTHR22891:SF25 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Genomic Order:  113
Name:  ? Glyma.05G011300 Secondary Identifier:  ? PAC:30526360
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G011300 0.5kb upstream 0.5kb upstream 17835 true Chr05: 986623-1004457 Glycine max
Glyma.05G011300 0.5kb upstream 0.5kb upstream 500 false Chr05: 1003958-1004457 Glycine max
Glyma.05G011300 0.5kb downstream 0.5kb downstream 17835 true Chr05: 986123-1003957 Glycine max
Glyma.05G011300 0.5kb downstream 0.5kb downstream 500 false Chr05: 986123-986622 Glycine max
Glyma.05G011300 1.0kb upstream 1.0kb upstream 18335 true Chr05: 986623-1004957 Glycine max
Glyma.05G011300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1003958-1004957 Glycine max
Glyma.05G011300 1.0kb downstream 1.0kb downstream 18335 true Chr05: 985623-1003957 Glycine max
Glyma.05G011300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 985623-986622 Glycine max
Glyma.05G011300 2.0kb upstream 2.0kb upstream 19335 true Chr05: 986623-1005957 Glycine max
Glyma.05G011300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1003958-1005957 Glycine max
Glyma.05G011300 2.0kb downstream 2.0kb downstream 19335 true Chr05: 984623-1003957 Glycine max
Glyma.05G011300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 984623-986622 Glycine max
Glyma.05G011300 5.0kb upstream 5.0kb upstream 22335 true Chr05: 986623-1008957 Glycine max
Glyma.05G011300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1003958-1008957 Glycine max
Glyma.05G011300 5.0kb downstream 5.0kb downstream 22335 true Chr05: 981623-1003957 Glycine max
Glyma.05G011300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 981623-986622 Glycine max
Glyma.05G011300 10.0kb upstream 10.0kb upstream 27335 true Chr05: 986623-1013957 Glycine max
Glyma.05G011300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1003958-1013957 Glycine max
Glyma.05G011300 10.0kb downstream 10.0kb downstream 27335 true Chr05: 976623-1003957 Glycine max
Glyma.05G011300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 976623-986622 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791835 5273 Angiosperm View MSA
122253770 5265 Fabidae View MSA
124070971 5270 Rosid View MSA
123742845 5271 Pentapetalae View MSA
122794533 5272 Eudicot View MSA
121352100 5274 Embryophyte View MSA
123382541 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.403384 0.0 2.31855    
cufflinks 3.96886 0.0 13.0562   High
cufflinks 1.05452 0.0 4.90094    
cufflinks 1.19173 0.0 5.31673    
cufflinks 0.192542 0.0 1.23217 Low  
cufflinks 0.0579559 0.0 0.229083 Low Low
cufflinks 0.213493 0.0 1.04631    
cufflinks 1.29949 0.0 5.55278    
cufflinks 0.155529 0.0 0.784123 Low  
cufflinks 1.592       High
cufflinks 0.002     Low Low
cufflinks 0.479        
cufflinks 0.027     Low  
cufflinks 0.058     Low  
cufflinks 0.002     Low Low
cufflinks 0.351        
cufflinks 0.024     Low  
cufflinks 0.653        
cufflinks 0.922       High
cufflinks 0.428        
cufflinks 0.004     Low Low
cufflinks 0.417        
cufflinks 0.424        
cufflinks 0.001     Low Low
cufflinks 0.355        
cufflinks 0.006     Low  

0 Strain