Gene : Glyma.05G034200 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1918//KOG1921 - 3-methyladenine DNA glycosidase // Endonuclease III Genomic Order:  342
Name:  ? Glyma.05G034200 Secondary Identifier:  ? PAC:30524668
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G034200 0.5kb upstream 0.5kb upstream 3612 true Chr05: 2994859-2998470 Glycine max
Glyma.05G034200 0.5kb upstream 0.5kb upstream 500 false Chr05: 2994859-2995358 Glycine max
Glyma.05G034200 0.5kb downstream 0.5kb downstream 3612 true Chr05: 2995359-2998970 Glycine max
Glyma.05G034200 0.5kb downstream 0.5kb downstream 500 false Chr05: 2998471-2998970 Glycine max
Glyma.05G034200 1.0kb upstream 1.0kb upstream 4112 true Chr05: 2994359-2998470 Glycine max
Glyma.05G034200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2994359-2995358 Glycine max
Glyma.05G034200 1.0kb downstream 1.0kb downstream 4112 true Chr05: 2995359-2999470 Glycine max
Glyma.05G034200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2998471-2999470 Glycine max
Glyma.05G034200 2.0kb upstream 2.0kb upstream 5112 true Chr05: 2993359-2998470 Glycine max
Glyma.05G034200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2993359-2995358 Glycine max
Glyma.05G034200 2.0kb downstream 2.0kb downstream 5112 true Chr05: 2995359-3000470 Glycine max
Glyma.05G034200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2998471-3000470 Glycine max
Glyma.05G034200 5.0kb upstream 5.0kb upstream 8112 true Chr05: 2990359-2998470 Glycine max
Glyma.05G034200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2990359-2995358 Glycine max
Glyma.05G034200 5.0kb downstream 5.0kb downstream 8112 true Chr05: 2995359-3003470 Glycine max
Glyma.05G034200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2998471-3003470 Glycine max
Glyma.05G034200 10.0kb upstream 10.0kb upstream 13112 true Chr05: 2985359-2998470 Glycine max
Glyma.05G034200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2985359-2995358 Glycine max
Glyma.05G034200 10.0kb downstream 10.0kb downstream 13112 true Chr05: 2995359-3008470 Glycine max
Glyma.05G034200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2998471-3008470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303422 5265 Fabidae View MSA
124061691 5270 Rosid View MSA
123751615 5271 Pentapetalae View MSA
122787983 5272 Eudicot View MSA
122044120 5273 Angiosperm View MSA
121310241 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.5794 0.0 8.55088    
cufflinks 6.9471 0.0 20.0806   High
cufflinks 8.72805 0.0 24.5967   High
cufflinks 3.47158 0.0 11.0474    
cufflinks 2.15587 0.0 7.28282    
cufflinks 1.31474 0.0 4.65509   Low
cufflinks 4.50232 0.0 13.7886    
cufflinks 2.78107 0.0 9.10862    
cufflinks 2.75647 0.0 9.03401    
cufflinks 1.559        
cufflinks 1.052        
cufflinks 3.136       High
cufflinks 0.744       Low
cufflinks 0.957        
cufflinks 1.245        
cufflinks 2.754        
cufflinks 0.756       Low
cufflinks 1.896        
cufflinks 4.751       High
cufflinks 2.336        
cufflinks 0.901        
cufflinks 2.314        
cufflinks 2.922       High
cufflinks 1.204        
cufflinks 2.138        
cufflinks 0.676       Low

0 Strain