Gene : Glyma.05G028400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  284
Name:  ? Glyma.05G028400 Secondary Identifier:  ? PAC:30525240
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY66-422 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G028400 0.5kb upstream 0.5kb upstream 4275 true Chr05: 2444345-2448619 Glycine max
Glyma.05G028400 0.5kb upstream 0.5kb upstream 500 false Chr05: 2448120-2448619 Glycine max
Glyma.05G028400 0.5kb downstream 0.5kb downstream 4275 true Chr05: 2443845-2448119 Glycine max
Glyma.05G028400 0.5kb downstream 0.5kb downstream 500 false Chr05: 2443845-2444344 Glycine max
Glyma.05G028400 1.0kb upstream 1.0kb upstream 4775 true Chr05: 2444345-2449119 Glycine max
Glyma.05G028400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2448120-2449119 Glycine max
Glyma.05G028400 1.0kb downstream 1.0kb downstream 4775 true Chr05: 2443345-2448119 Glycine max
Glyma.05G028400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2443345-2444344 Glycine max
Glyma.05G028400 2.0kb upstream 2.0kb upstream 5775 true Chr05: 2444345-2450119 Glycine max
Glyma.05G028400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2448120-2450119 Glycine max
Glyma.05G028400 2.0kb downstream 2.0kb downstream 5775 true Chr05: 2442345-2448119 Glycine max
Glyma.05G028400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2442345-2444344 Glycine max
Glyma.05G028400 5.0kb upstream 5.0kb upstream 8775 true Chr05: 2444345-2453119 Glycine max
Glyma.05G028400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2448120-2453119 Glycine max
Glyma.05G028400 5.0kb downstream 5.0kb downstream 8775 true Chr05: 2439345-2448119 Glycine max
Glyma.05G028400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2439345-2444344 Glycine max
Glyma.05G028400 10.0kb upstream 10.0kb upstream 13775 true Chr05: 2444345-2458119 Glycine max
Glyma.05G028400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2448120-2458119 Glycine max
Glyma.05G028400 10.0kb downstream 10.0kb downstream 13775 true Chr05: 2434345-2448119 Glycine max
Glyma.05G028400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2434345-2444344 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308782 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0224455 0.0 0.10151 Low Low
cufflinks 0.0869587 0.0 0.354772 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0585282 0.0 0.24439 Low  
cufflinks 0.0433509 0.0 0.184857 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.015     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low High
cufflinks 0.014     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low

0 Strain