Gene : Glyma.05G028500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Genomic Order:  285
Name:  ? Glyma.05G028500 Secondary Identifier:  ? PAC:30524061
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G028500 0.5kb upstream 0.5kb upstream 10496 true Chr05: 2449777-2460272 Glycine max
Glyma.05G028500 0.5kb upstream 0.5kb upstream 500 false Chr05: 2459773-2460272 Glycine max
Glyma.05G028500 0.5kb downstream 0.5kb downstream 10496 true Chr05: 2449277-2459772 Glycine max
Glyma.05G028500 0.5kb downstream 0.5kb downstream 500 false Chr05: 2449277-2449776 Glycine max
Glyma.05G028500 1.0kb upstream 1.0kb upstream 10996 true Chr05: 2449777-2460772 Glycine max
Glyma.05G028500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2459773-2460772 Glycine max
Glyma.05G028500 1.0kb downstream 1.0kb downstream 10996 true Chr05: 2448777-2459772 Glycine max
Glyma.05G028500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2448777-2449776 Glycine max
Glyma.05G028500 2.0kb upstream 2.0kb upstream 11996 true Chr05: 2449777-2461772 Glycine max
Glyma.05G028500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2459773-2461772 Glycine max
Glyma.05G028500 2.0kb downstream 2.0kb downstream 11996 true Chr05: 2447777-2459772 Glycine max
Glyma.05G028500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2447777-2449776 Glycine max
Glyma.05G028500 5.0kb upstream 5.0kb upstream 14996 true Chr05: 2449777-2464772 Glycine max
Glyma.05G028500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2459773-2464772 Glycine max
Glyma.05G028500 5.0kb downstream 5.0kb downstream 14996 true Chr05: 2444777-2459772 Glycine max
Glyma.05G028500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2444777-2449776 Glycine max
Glyma.05G028500 10.0kb upstream 10.0kb upstream 19996 true Chr05: 2449777-2469772 Glycine max
Glyma.05G028500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2459773-2469772 Glycine max
Glyma.05G028500 10.0kb downstream 10.0kb downstream 19996 true Chr05: 2439777-2459772 Glycine max
Glyma.05G028500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2439777-2449776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
122309989 5265 Fabidae View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20188 0.0 6.53908    
cufflinks 3.3187 0.0 9.36957    
cufflinks 1.84204 0.0 5.59148    
cufflinks 6.16127 0.0 16.5934   High
cufflinks 2.14555 0.0 6.39213    
cufflinks 1.67689 0.0 5.16535   Low
cufflinks 6.72665 0.0 18.0633   High
cufflinks 3.39198 0.0 9.54722    
cufflinks 2.49088 0.0 7.27129    
cufflinks 1.543        
cufflinks 0.093       Low
cufflinks 1.238        
cufflinks 0.752        
cufflinks 0.715        
cufflinks 0.187       Low
cufflinks 0.999        
cufflinks 0.324        
cufflinks 2.251       High
cufflinks 1.354        
cufflinks 1.119        
cufflinks 0.134       Low
cufflinks 1.064        
cufflinks 1.311        
cufflinks 0.194       Low
cufflinks 0.963        
cufflinks 0.27        

0 Strain