Gene : Glyma.05G023400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31471:SF8 - GB Genomic Order:  234
Name:  ? Glyma.05G023400 Secondary Identifier:  ? PAC:30525819
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G023400 0.5kb upstream 0.5kb upstream 1794 true Chr05: 2042226-2044019 Glycine max
Glyma.05G023400 0.5kb upstream 0.5kb upstream 500 false Chr05: 2042226-2042725 Glycine max
Glyma.05G023400 0.5kb downstream 0.5kb downstream 1794 true Chr05: 2042726-2044519 Glycine max
Glyma.05G023400 0.5kb downstream 0.5kb downstream 500 false Chr05: 2044020-2044519 Glycine max
Glyma.05G023400 1.0kb upstream 1.0kb upstream 2294 true Chr05: 2041726-2044019 Glycine max
Glyma.05G023400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2041726-2042725 Glycine max
Glyma.05G023400 1.0kb downstream 1.0kb downstream 2294 true Chr05: 2042726-2045019 Glycine max
Glyma.05G023400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2044020-2045019 Glycine max
Glyma.05G023400 2.0kb upstream 2.0kb upstream 3294 true Chr05: 2040726-2044019 Glycine max
Glyma.05G023400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2040726-2042725 Glycine max
Glyma.05G023400 2.0kb downstream 2.0kb downstream 3294 true Chr05: 2042726-2046019 Glycine max
Glyma.05G023400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2044020-2046019 Glycine max
Glyma.05G023400 5.0kb upstream 5.0kb upstream 6294 true Chr05: 2037726-2044019 Glycine max
Glyma.05G023400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2037726-2042725 Glycine max
Glyma.05G023400 5.0kb downstream 5.0kb downstream 6294 true Chr05: 2042726-2049019 Glycine max
Glyma.05G023400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2044020-2049019 Glycine max
Glyma.05G023400 10.0kb upstream 10.0kb upstream 11294 true Chr05: 2032726-2044019 Glycine max
Glyma.05G023400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2032726-2042725 Glycine max
Glyma.05G023400 10.0kb downstream 10.0kb downstream 11294 true Chr05: 2042726-2054019 Glycine max
Glyma.05G023400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2044020-2054019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250622 5265 Fabidae View MSA
123993752 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.425701 0.0 1.65139    
cufflinks 0.617437 0.0 2.35592   High
cufflinks 0.38781 0.0 1.50758    
cufflinks 0.39011 0.0 1.51513    
cufflinks 0.373458 0.0 1.45439    
cufflinks 0.396928 0.0 1.54429    
cufflinks 0.231839 0.0 0.91892   Low
cufflinks 0.397552 0.0 1.54271    
cufflinks 0.561157 0.0 2.14789   High
cufflinks 0.611        
cufflinks 0.268       Low
cufflinks 0.869        
cufflinks 1.601       High
cufflinks 1.135       High
cufflinks 0.206       Low
cufflinks 0.962        
cufflinks 0.249       Low
cufflinks 1.051        
cufflinks 0.683        
cufflinks 0.789        
cufflinks 0.328        
cufflinks 0.778        
cufflinks 0.716        
cufflinks 0.303       Low
cufflinks 0.616        
cufflinks 0.404        

0 Strain