Gene : Glyma.05G052300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11885 - RIBOSOMAL PROTEIN S15P/S13E Genomic Order:  523
Name:  ? Glyma.05G052300 Secondary Identifier:  ? PAC:30523716
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G052300 0.5kb upstream 0.5kb upstream 2670 true Chr05: 4687696-4690365 Glycine max
Glyma.05G052300 0.5kb upstream 0.5kb upstream 500 false Chr05: 4689866-4690365 Glycine max
Glyma.05G052300 0.5kb downstream 0.5kb downstream 2670 true Chr05: 4687196-4689865 Glycine max
Glyma.05G052300 0.5kb downstream 0.5kb downstream 500 false Chr05: 4687196-4687695 Glycine max
Glyma.05G052300 1.0kb upstream 1.0kb upstream 3170 true Chr05: 4687696-4690865 Glycine max
Glyma.05G052300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4689866-4690865 Glycine max
Glyma.05G052300 1.0kb downstream 1.0kb downstream 3170 true Chr05: 4686696-4689865 Glycine max
Glyma.05G052300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4686696-4687695 Glycine max
Glyma.05G052300 2.0kb upstream 2.0kb upstream 4170 true Chr05: 4687696-4691865 Glycine max
Glyma.05G052300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4689866-4691865 Glycine max
Glyma.05G052300 2.0kb downstream 2.0kb downstream 4170 true Chr05: 4685696-4689865 Glycine max
Glyma.05G052300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4685696-4687695 Glycine max
Glyma.05G052300 5.0kb upstream 5.0kb upstream 7170 true Chr05: 4687696-4694865 Glycine max
Glyma.05G052300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4689866-4694865 Glycine max
Glyma.05G052300 5.0kb downstream 5.0kb downstream 7170 true Chr05: 4682696-4689865 Glycine max
Glyma.05G052300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4682696-4687695 Glycine max
Glyma.05G052300 10.0kb upstream 10.0kb upstream 12170 true Chr05: 4687696-4699865 Glycine max
Glyma.05G052300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4689866-4699865 Glycine max
Glyma.05G052300 10.0kb downstream 10.0kb downstream 12170 true Chr05: 4677696-4689865 Glycine max
Glyma.05G052300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4677696-4687695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312177 5265 Fabidae View MSA
124068478 5270 Rosid View MSA
123750246 5271 Pentapetalae View MSA
122796127 5272 Eudicot View MSA
122043719 5273 Angiosperm View MSA
121347560 5274 Embryophyte View MSA
123424528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.5028 0.0 321.538 High  
cufflinks 101.146 0.0 369.152 High  
cufflinks 41.7468 0.0 134.004 High Low
cufflinks 70.4689 0.0 238.227 High  
cufflinks 163.15 0.0 576.627 High High
cufflinks 104.36 0.0 383.657 High  
cufflinks 153.573 0.0 525.466 High High
cufflinks 101.126 0.0 369.993 High  
cufflinks 106.393 0.0 394.211 High  
cufflinks 9.56     High  
cufflinks 2.963       Low
cufflinks 8.679     High  
cufflinks 21.27     High High
cufflinks 29.484     High High
cufflinks 3.908       Low
cufflinks 9.459     High  
cufflinks 5.683        
cufflinks 8.939     High  
cufflinks 12.855     High  
cufflinks 7.434     High  
cufflinks 5.276        
cufflinks 7.739     High  
cufflinks 11.923     High  
cufflinks 3.667       Low
cufflinks 8.53     High  
cufflinks 6.257        

0 Strain