Gene : Glyma.05G052600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11885 - RIBOSOMAL PROTEIN S15P/S13E Genomic Order:  525
Name:  ? Glyma.05G052600 Secondary Identifier:  ? PAC:30527015
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G052600 0.5kb upstream 0.5kb upstream 16607 true Chr05: 4704019-4720625 Glycine max
Glyma.05G052600 0.5kb upstream 0.5kb upstream 500 false Chr05: 4720126-4720625 Glycine max
Glyma.05G052600 0.5kb downstream 0.5kb downstream 16607 true Chr05: 4703519-4720125 Glycine max
Glyma.05G052600 0.5kb downstream 0.5kb downstream 500 false Chr05: 4703519-4704018 Glycine max
Glyma.05G052600 1.0kb upstream 1.0kb upstream 17107 true Chr05: 4704019-4721125 Glycine max
Glyma.05G052600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4720126-4721125 Glycine max
Glyma.05G052600 1.0kb downstream 1.0kb downstream 17107 true Chr05: 4703019-4720125 Glycine max
Glyma.05G052600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4703019-4704018 Glycine max
Glyma.05G052600 2.0kb upstream 2.0kb upstream 18107 true Chr05: 4704019-4722125 Glycine max
Glyma.05G052600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4720126-4722125 Glycine max
Glyma.05G052600 2.0kb downstream 2.0kb downstream 18107 true Chr05: 4702019-4720125 Glycine max
Glyma.05G052600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4702019-4704018 Glycine max
Glyma.05G052600 5.0kb upstream 5.0kb upstream 21107 true Chr05: 4704019-4725125 Glycine max
Glyma.05G052600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4720126-4725125 Glycine max
Glyma.05G052600 5.0kb downstream 5.0kb downstream 21107 true Chr05: 4699019-4720125 Glycine max
Glyma.05G052600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4699019-4704018 Glycine max
Glyma.05G052600 10.0kb upstream 10.0kb upstream 26107 true Chr05: 4704019-4730125 Glycine max
Glyma.05G052600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4720126-4730125 Glycine max
Glyma.05G052600 10.0kb downstream 10.0kb downstream 26107 true Chr05: 4694019-4720125 Glycine max
Glyma.05G052600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4694019-4704018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312177 5265 Fabidae View MSA
124068478 5270 Rosid View MSA
123750246 5271 Pentapetalae View MSA
122796127 5272 Eudicot View MSA
122043719 5273 Angiosperm View MSA
121347560 5274 Embryophyte View MSA
123424528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.1691 0.0 854.98 High  
cufflinks 118.805 0.0 1233.55 High  
cufflinks 50.0514 0.0 391.487 High Low
cufflinks 79.2538 0.0 748.422 High  
cufflinks 191.127 0.0 2567.09 High High
cufflinks 142.287 0.0 1650.92 High  
cufflinks 150.149 0.0 1560.18 High  
cufflinks 124.895 0.0 1323.29 High  
cufflinks 128.161 0.0 1332.81 High  
cufflinks 1.411        
cufflinks 0.498       Low
cufflinks 1.39        
cufflinks 3.45       High
cufflinks 5.052       High
cufflinks 0.564       Low
cufflinks 1.134        
cufflinks 0.857        
cufflinks 1.391        
cufflinks 1.997        
cufflinks 0.958        
cufflinks 0.781        
cufflinks 1.008        
cufflinks 1.532        
cufflinks 0.605       Low
cufflinks 1.102        
cufflinks 1.001        

0 Strain