Gene : Glyma.05G046700 G. max Wm82.a2.v1
Defline:  (1 of 6) 6.3.4.5 - Argininosuccinate synthase / Citrulline--aspartate ligase Genomic Order:  467
Name:  ? Glyma.05G046700 Secondary Identifier:  ? PAC:30523713
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSYNBSUB-PWY Glycine max pathologic  
Gmax ARGSYN-PWY Glycine max pathologic  
Gmax PWY-4984 Glycine max pathologic  
Gmax PWY-5 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G046700 0.5kb upstream 0.5kb upstream 4583 true Chr05: 4160752-4165334 Glycine max
Glyma.05G046700 0.5kb upstream 0.5kb upstream 500 false Chr05: 4160752-4161251 Glycine max
Glyma.05G046700 0.5kb downstream 0.5kb downstream 4583 true Chr05: 4161252-4165834 Glycine max
Glyma.05G046700 0.5kb downstream 0.5kb downstream 500 false Chr05: 4165335-4165834 Glycine max
Glyma.05G046700 1.0kb upstream 1.0kb upstream 5083 true Chr05: 4160252-4165334 Glycine max
Glyma.05G046700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4160252-4161251 Glycine max
Glyma.05G046700 1.0kb downstream 1.0kb downstream 5083 true Chr05: 4161252-4166334 Glycine max
Glyma.05G046700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4165335-4166334 Glycine max
Glyma.05G046700 2.0kb upstream 2.0kb upstream 6083 true Chr05: 4159252-4165334 Glycine max
Glyma.05G046700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4159252-4161251 Glycine max
Glyma.05G046700 2.0kb downstream 2.0kb downstream 6083 true Chr05: 4161252-4167334 Glycine max
Glyma.05G046700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4165335-4167334 Glycine max
Glyma.05G046700 5.0kb upstream 5.0kb upstream 9083 true Chr05: 4156252-4165334 Glycine max
Glyma.05G046700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4156252-4161251 Glycine max
Glyma.05G046700 5.0kb downstream 5.0kb downstream 9083 true Chr05: 4161252-4170334 Glycine max
Glyma.05G046700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4165335-4170334 Glycine max
Glyma.05G046700 10.0kb upstream 10.0kb upstream 14083 true Chr05: 4151252-4165334 Glycine max
Glyma.05G046700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4151252-4161251 Glycine max
Glyma.05G046700 10.0kb downstream 10.0kb downstream 14083 true Chr05: 4161252-4175334 Glycine max
Glyma.05G046700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4165335-4175334 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041429 5273 Angiosperm View MSA
122300125 5265 Fabidae View MSA
124073317 5270 Rosid View MSA
123751861 5271 Pentapetalae View MSA
122792518 5272 Eudicot View MSA
121345676 5274 Embryophyte View MSA
123423772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.52433 0.0 25.8837    
cufflinks 13.7044 0.0 36.6688    
cufflinks 6.70118 0.0 18.6397   Low
cufflinks 14.8657 0.0 39.7074    
cufflinks 25.4159 0.0 68.298 High High
cufflinks 13.1662 0.0 35.2598    
cufflinks 25.7183 0.0 69.1632 High High
cufflinks 13.6736 0.0 36.578    
cufflinks 14.8478 0.0 39.6564    
cufflinks 5.97        
cufflinks 0.871       Low
cufflinks 5.233        
cufflinks 14.562     High High
cufflinks 19.257     High High
cufflinks 2.081        
cufflinks 2.876        
cufflinks 2.522        
cufflinks 5.096        
cufflinks 7.043        
cufflinks 1.976        
cufflinks 1.261       Low
cufflinks 2.5        
cufflinks 4.19        
cufflinks 0.724       Low
cufflinks 2.726        
cufflinks 2.805        

0 Strain