Gene : Glyma.05G050200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14237//PTHR14237:SF29 - MOLYBDOPTERIN COFACTOR SULFURASE MOSC Genomic Order:  502
Name:  ? Glyma.05G050200 Secondary Identifier:  ? PAC:30525922
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5963 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G050200 0.5kb upstream 0.5kb upstream 2333 true Chr05: 4493848-4496180 Glycine max
Glyma.05G050200 0.5kb upstream 0.5kb upstream 500 false Chr05: 4493848-4494347 Glycine max
Glyma.05G050200 0.5kb downstream 0.5kb downstream 2333 true Chr05: 4494348-4496680 Glycine max
Glyma.05G050200 0.5kb downstream 0.5kb downstream 500 false Chr05: 4496181-4496680 Glycine max
Glyma.05G050200 1.0kb upstream 1.0kb upstream 2833 true Chr05: 4493348-4496180 Glycine max
Glyma.05G050200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4493348-4494347 Glycine max
Glyma.05G050200 1.0kb downstream 1.0kb downstream 2833 true Chr05: 4494348-4497180 Glycine max
Glyma.05G050200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4496181-4497180 Glycine max
Glyma.05G050200 2.0kb upstream 2.0kb upstream 3833 true Chr05: 4492348-4496180 Glycine max
Glyma.05G050200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4492348-4494347 Glycine max
Glyma.05G050200 2.0kb downstream 2.0kb downstream 3833 true Chr05: 4494348-4498180 Glycine max
Glyma.05G050200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4496181-4498180 Glycine max
Glyma.05G050200 5.0kb upstream 5.0kb upstream 6833 true Chr05: 4489348-4496180 Glycine max
Glyma.05G050200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4489348-4494347 Glycine max
Glyma.05G050200 5.0kb downstream 5.0kb downstream 6833 true Chr05: 4494348-4501180 Glycine max
Glyma.05G050200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4496181-4501180 Glycine max
Glyma.05G050200 10.0kb upstream 10.0kb upstream 11833 true Chr05: 4484348-4496180 Glycine max
Glyma.05G050200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4484348-4494347 Glycine max
Glyma.05G050200 10.0kb downstream 10.0kb downstream 11833 true Chr05: 4494348-4506180 Glycine max
Glyma.05G050200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4496181-4506180 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314685 5265 Fabidae View MSA
124069827 5270 Rosid View MSA
123745676 5271 Pentapetalae View MSA
122790060 5272 Eudicot View MSA
122044983 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.588449 0.0 2.15527    
cufflinks 1.14332 0.0 3.99508   High
cufflinks 0.223688 0.0 0.856143    
cufflinks 0.0651363 0.0 0.261762 Low Low
cufflinks 0.114476 0.0 0.451015 Low  
cufflinks 0.56953 0.0 2.08955    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.163676 0.0 0.635151 Low  
cufflinks 0.0845218 0.0 0.336447 Low  
cufflinks 0.83        
cufflinks 0.116        
cufflinks 0.771        
cufflinks 0.097        
cufflinks 0.076       Low
cufflinks 0.02     Low Low
cufflinks 0.702        
cufflinks 0.583        
cufflinks 0.626        
cufflinks 1.5       High
cufflinks 0.458        
cufflinks 0.074       Low
cufflinks 0.554        
cufflinks 1.018       High
cufflinks 0.156        
cufflinks 0.365        
cufflinks 0.278        

0 Strain