Gene : Glyma.05G042400 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  424
Name:  ? Glyma.05G042400 Secondary Identifier:  ? PAC:30525984
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PYRIDNUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G042400 0.5kb upstream 0.5kb upstream 5618 true Chr05: 3781838-3787455 Glycine max
Glyma.05G042400 0.5kb upstream 0.5kb upstream 500 false Chr05: 3786956-3787455 Glycine max
Glyma.05G042400 0.5kb downstream 0.5kb downstream 5618 true Chr05: 3781338-3786955 Glycine max
Glyma.05G042400 0.5kb downstream 0.5kb downstream 500 false Chr05: 3781338-3781837 Glycine max
Glyma.05G042400 1.0kb upstream 1.0kb upstream 6118 true Chr05: 3781838-3787955 Glycine max
Glyma.05G042400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3786956-3787955 Glycine max
Glyma.05G042400 1.0kb downstream 1.0kb downstream 6118 true Chr05: 3780838-3786955 Glycine max
Glyma.05G042400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3780838-3781837 Glycine max
Glyma.05G042400 2.0kb upstream 2.0kb upstream 7118 true Chr05: 3781838-3788955 Glycine max
Glyma.05G042400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3786956-3788955 Glycine max
Glyma.05G042400 2.0kb downstream 2.0kb downstream 7118 true Chr05: 3779838-3786955 Glycine max
Glyma.05G042400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3779838-3781837 Glycine max
Glyma.05G042400 5.0kb upstream 5.0kb upstream 10118 true Chr05: 3781838-3791955 Glycine max
Glyma.05G042400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3786956-3791955 Glycine max
Glyma.05G042400 5.0kb downstream 5.0kb downstream 10118 true Chr05: 3776838-3786955 Glycine max
Glyma.05G042400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3776838-3781837 Glycine max
Glyma.05G042400 10.0kb upstream 10.0kb upstream 15118 true Chr05: 3781838-3796955 Glycine max
Glyma.05G042400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3786956-3796955 Glycine max
Glyma.05G042400 10.0kb downstream 10.0kb downstream 15118 true Chr05: 3771838-3786955 Glycine max
Glyma.05G042400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3771838-3781837 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305175 5265 Fabidae View MSA
124063584 5270 Rosid View MSA
123753415 5271 Pentapetalae View MSA
122792816 5272 Eudicot View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.2208 0.0 64.2669 High High
cufflinks 3.76005 0.0 10.5538    
cufflinks 6.27514 0.0 16.9344    
cufflinks 0.707855 0.0 2.45672   Low
cufflinks 5.20133 0.0 14.1883    
cufflinks 7.90631 0.0 21.1576    
cufflinks 3.22951 0.0 9.20207    
cufflinks 2.6702 0.0 7.79656    
cufflinks 6.31275 0.0 17.0344    
cufflinks 1.145       Low
cufflinks 1.381       Low
cufflinks 3.394        
cufflinks 2.994        
cufflinks 2.331        
cufflinks 1.05       Low
cufflinks 5.631       High
cufflinks 4.267        
cufflinks 3.549        
cufflinks 2.685        
cufflinks 4.876        
cufflinks 1.468       Low
cufflinks 6.555       High
cufflinks 6.547       High
cufflinks 3.026        
cufflinks 4.36        
cufflinks 1.491       Low

0 Strain