Gene : Glyma.05G043200 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  432
Name:  ? Glyma.05G043200 Secondary Identifier:  ? PAC:30526344
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G043200 0.5kb upstream 0.5kb upstream 3234 true Chr05: 3861621-3864854 Glycine max
Glyma.05G043200 0.5kb upstream 0.5kb upstream 500 false Chr05: 3861621-3862120 Glycine max
Glyma.05G043200 0.5kb downstream 0.5kb downstream 3234 true Chr05: 3862121-3865354 Glycine max
Glyma.05G043200 0.5kb downstream 0.5kb downstream 500 false Chr05: 3864855-3865354 Glycine max
Glyma.05G043200 1.0kb upstream 1.0kb upstream 3734 true Chr05: 3861121-3864854 Glycine max
Glyma.05G043200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3861121-3862120 Glycine max
Glyma.05G043200 1.0kb downstream 1.0kb downstream 3734 true Chr05: 3862121-3865854 Glycine max
Glyma.05G043200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3864855-3865854 Glycine max
Glyma.05G043200 2.0kb upstream 2.0kb upstream 4734 true Chr05: 3860121-3864854 Glycine max
Glyma.05G043200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3860121-3862120 Glycine max
Glyma.05G043200 2.0kb downstream 2.0kb downstream 4734 true Chr05: 3862121-3866854 Glycine max
Glyma.05G043200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3864855-3866854 Glycine max
Glyma.05G043200 5.0kb upstream 5.0kb upstream 7734 true Chr05: 3857121-3864854 Glycine max
Glyma.05G043200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3857121-3862120 Glycine max
Glyma.05G043200 5.0kb downstream 5.0kb downstream 7734 true Chr05: 3862121-3869854 Glycine max
Glyma.05G043200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3864855-3869854 Glycine max
Glyma.05G043200 10.0kb upstream 10.0kb upstream 12734 true Chr05: 3852121-3864854 Glycine max
Glyma.05G043200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3852121-3862120 Glycine max
Glyma.05G043200 10.0kb downstream 10.0kb downstream 12734 true Chr05: 3862121-3874854 Glycine max
Glyma.05G043200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3864855-3874854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311662 5265 Fabidae View MSA
124073002 5270 Rosid View MSA
123747230 5271 Pentapetalae View MSA
122795057 5272 Eudicot View MSA
122047062 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.4339 0.0 282.213 High High
cufflinks 66.2257 0.0 186.6 High High
cufflinks 29.0077 0.0 77.4955 High  
cufflinks 34.3603 0.0 92.2768 High  
cufflinks 23.8103 0.0 63.5231 High  
cufflinks 18.6982 0.0 50.0475    
cufflinks 29.423 0.0 78.6764 High  
cufflinks 44.8583 0.0 122.269 High  
cufflinks 12.9577 0.0 35.203   Low
cufflinks 30.667     High  
cufflinks 8.216     High  
cufflinks 19.49     High  
cufflinks 9.893     High  
cufflinks 10.57     High  
cufflinks 7.926     High  
cufflinks 107.21     High High
cufflinks 10.342     High  
cufflinks 23.124     High  
cufflinks 37.905     High  
cufflinks 114.853     High High
cufflinks 8.766     High  
cufflinks 97.768     High High
cufflinks 107.378     High High
cufflinks 6.357     High Low
cufflinks 105.454     High High
cufflinks 7.57     High Low

0 Strain