Gene : Glyma.05G044300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12506:SF20 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Genomic Order:  443
Name:  ? Glyma.05G044300 Secondary Identifier:  ? PAC:30526373
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G044300 0.5kb upstream 0.5kb upstream 5145 true Chr05: 3965296-3970440 Glycine max
Glyma.05G044300 0.5kb upstream 0.5kb upstream 500 false Chr05: 3965296-3965795 Glycine max
Glyma.05G044300 0.5kb downstream 0.5kb downstream 5145 true Chr05: 3965796-3970940 Glycine max
Glyma.05G044300 0.5kb downstream 0.5kb downstream 500 false Chr05: 3970441-3970940 Glycine max
Glyma.05G044300 1.0kb upstream 1.0kb upstream 5645 true Chr05: 3964796-3970440 Glycine max
Glyma.05G044300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3964796-3965795 Glycine max
Glyma.05G044300 1.0kb downstream 1.0kb downstream 5645 true Chr05: 3965796-3971440 Glycine max
Glyma.05G044300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3970441-3971440 Glycine max
Glyma.05G044300 2.0kb upstream 2.0kb upstream 6645 true Chr05: 3963796-3970440 Glycine max
Glyma.05G044300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3963796-3965795 Glycine max
Glyma.05G044300 2.0kb downstream 2.0kb downstream 6645 true Chr05: 3965796-3972440 Glycine max
Glyma.05G044300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3970441-3972440 Glycine max
Glyma.05G044300 5.0kb upstream 5.0kb upstream 9645 true Chr05: 3960796-3970440 Glycine max
Glyma.05G044300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3960796-3965795 Glycine max
Glyma.05G044300 5.0kb downstream 5.0kb downstream 9645 true Chr05: 3965796-3975440 Glycine max
Glyma.05G044300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3970441-3975440 Glycine max
Glyma.05G044300 10.0kb upstream 10.0kb upstream 14645 true Chr05: 3955796-3970440 Glycine max
Glyma.05G044300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3955796-3965795 Glycine max
Glyma.05G044300 10.0kb downstream 10.0kb downstream 14645 true Chr05: 3965796-3980440 Glycine max
Glyma.05G044300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3970441-3980440 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315095 5265 Fabidae View MSA
124063047 5270 Rosid View MSA
123746859 5271 Pentapetalae View MSA
122797489 5272 Eudicot View MSA
122049599 5273 Angiosperm View MSA
121311496 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7885 0.0 34.1349   Low
cufflinks 24.8593 0.0 67.4528 High  
cufflinks 12.9556 0.0 34.5696   Low
cufflinks 24.1341 0.0 65.4528 High  
cufflinks 27.3368 0.0 74.634 High  
cufflinks 29.5653 0.0 81.2494 High  
cufflinks 25.154 0.0 68.3039 High  
cufflinks 34.674 0.0 96.9082 High High
cufflinks 27.4096 0.0 74.8897 High  
cufflinks 16.33     High  
cufflinks 8.426     High Low
cufflinks 10.768     High  
cufflinks 17.79     High High
cufflinks 20.572     High High
cufflinks 17.257     High High
cufflinks 11.214     High  
cufflinks 10.176     High Low
cufflinks 16.137     High  
cufflinks 16.469     High  
cufflinks 10.546     High  
cufflinks 14.928     High  
cufflinks 11.77     High  
cufflinks 14.478     High  
cufflinks 10.087     High Low
cufflinks 10.798     High  
cufflinks 12.902     High  

0 Strain