Gene : Glyma.05G044800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21109:SF0 - 28S RIBOSOMAL PROTEIN S21, MITOCHONDRIAL Genomic Order:  448
Name:  ? Glyma.05G044800 Secondary Identifier:  ? PAC:30526348
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G044800 0.5kb upstream 0.5kb upstream 1802 true Chr05: 3995250-3997051 Glycine max
Glyma.05G044800 0.5kb upstream 0.5kb upstream 500 false Chr05: 3995250-3995749 Glycine max
Glyma.05G044800 0.5kb downstream 0.5kb downstream 1802 true Chr05: 3995750-3997551 Glycine max
Glyma.05G044800 0.5kb downstream 0.5kb downstream 500 false Chr05: 3997052-3997551 Glycine max
Glyma.05G044800 1.0kb upstream 1.0kb upstream 2302 true Chr05: 3994750-3997051 Glycine max
Glyma.05G044800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3994750-3995749 Glycine max
Glyma.05G044800 1.0kb downstream 1.0kb downstream 2302 true Chr05: 3995750-3998051 Glycine max
Glyma.05G044800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3997052-3998051 Glycine max
Glyma.05G044800 2.0kb upstream 2.0kb upstream 3302 true Chr05: 3993750-3997051 Glycine max
Glyma.05G044800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3993750-3995749 Glycine max
Glyma.05G044800 2.0kb downstream 2.0kb downstream 3302 true Chr05: 3995750-3999051 Glycine max
Glyma.05G044800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3997052-3999051 Glycine max
Glyma.05G044800 5.0kb upstream 5.0kb upstream 6302 true Chr05: 3990750-3997051 Glycine max
Glyma.05G044800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3990750-3995749 Glycine max
Glyma.05G044800 5.0kb downstream 5.0kb downstream 6302 true Chr05: 3995750-4002051 Glycine max
Glyma.05G044800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3997052-4002051 Glycine max
Glyma.05G044800 10.0kb upstream 10.0kb upstream 11302 true Chr05: 3985750-3997051 Glycine max
Glyma.05G044800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3985750-3995749 Glycine max
Glyma.05G044800 10.0kb downstream 10.0kb downstream 11302 true Chr05: 3995750-4007051 Glycine max
Glyma.05G044800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3997052-4007051 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312863 5265 Fabidae View MSA
124036750 5270 Rosid View MSA
123743527 5271 Pentapetalae View MSA
122770688 5272 Eudicot View MSA
122049623 5273 Angiosperm View MSA
121349916 5274 Embryophyte View MSA
123426860 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87804 0.0 12.0693   Low
cufflinks 3.1431 0.0 17.4256    
cufflinks 2.78641 0.0 10.3709    
cufflinks 2.93587 0.0 15.2498    
cufflinks 3.55567 0.0 19.4219    
cufflinks 3.1891 0.0 16.8802    
cufflinks 2.21464 0.0 12.7719   Low
cufflinks 3.13167 0.0 16.2045    
cufflinks 5.69513 0.0 24.6057   High
cufflinks 0.333       Low
cufflinks 2.42       High
cufflinks 1.483        
cufflinks 1.391        
cufflinks 1.646        
cufflinks 4.413       High
cufflinks 1.042        
cufflinks 0.68       Low
cufflinks 1.336        
cufflinks 1.98        
cufflinks 0.88        
cufflinks 2.084        
cufflinks 1.147        
cufflinks 0.851        
cufflinks 1.411        
cufflinks 0.952        
cufflinks 1.557        

0 Strain