Gene : Glyma.05G045200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Genomic Order:  452
Name:  ? Glyma.05G045200 Secondary Identifier:  ? PAC:30526364
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-6545 Glycine max pathologic  
Gmax PWY-7176 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  
Gmax PWY-7197 Glycine max pathologic  
Gmax PWY-7200 Glycine max pathologic  
Gmax PWY-7205 Glycine max pathologic  
Gmax PWY-7208 Glycine max pathologic  
Gmax PWY-7210 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  
Gmax PWY-7220 Glycine max pathologic  
Gmax PWY-7221 Glycine max pathologic  
Gmax PWY-7222 Glycine max pathologic  
Gmax PWY-7224 Glycine max pathologic  
Gmax PWY-7226 Glycine max pathologic  
Gmax PWY-7227 Glycine max pathologic  
Gmax PWY-7228 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G045200 0.5kb upstream 0.5kb upstream 4654 true Chr05: 4018865-4023518 Glycine max
Glyma.05G045200 0.5kb upstream 0.5kb upstream 500 false Chr05: 4023019-4023518 Glycine max
Glyma.05G045200 0.5kb downstream 0.5kb downstream 4654 true Chr05: 4018365-4023018 Glycine max
Glyma.05G045200 0.5kb downstream 0.5kb downstream 500 false Chr05: 4018365-4018864 Glycine max
Glyma.05G045200 1.0kb upstream 1.0kb upstream 5154 true Chr05: 4018865-4024018 Glycine max
Glyma.05G045200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4023019-4024018 Glycine max
Glyma.05G045200 1.0kb downstream 1.0kb downstream 5154 true Chr05: 4017865-4023018 Glycine max
Glyma.05G045200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4017865-4018864 Glycine max
Glyma.05G045200 2.0kb upstream 2.0kb upstream 6154 true Chr05: 4018865-4025018 Glycine max
Glyma.05G045200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4023019-4025018 Glycine max
Glyma.05G045200 2.0kb downstream 2.0kb downstream 6154 true Chr05: 4016865-4023018 Glycine max
Glyma.05G045200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4016865-4018864 Glycine max
Glyma.05G045200 5.0kb upstream 5.0kb upstream 9154 true Chr05: 4018865-4028018 Glycine max
Glyma.05G045200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4023019-4028018 Glycine max
Glyma.05G045200 5.0kb downstream 5.0kb downstream 9154 true Chr05: 4013865-4023018 Glycine max
Glyma.05G045200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4013865-4018864 Glycine max
Glyma.05G045200 10.0kb upstream 10.0kb upstream 14154 true Chr05: 4018865-4033018 Glycine max
Glyma.05G045200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4023019-4033018 Glycine max
Glyma.05G045200 10.0kb downstream 10.0kb downstream 14154 true Chr05: 4008865-4023018 Glycine max
Glyma.05G045200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4008865-4018864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300564 5265 Fabidae View MSA
124063920 5270 Rosid View MSA
123743535 5271 Pentapetalae View MSA
122788809 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.2654 0.0 75.6024 High High
cufflinks 16.8438 0.0 46.1585    
cufflinks 5.18991 0.0 16.3728   Low
cufflinks 7.2317 0.0 21.795    
cufflinks 12.3122 0.0 34.7038    
cufflinks 8.81333 0.0 25.851    
cufflinks 14.299 0.0 39.722    
cufflinks 8.30316 0.0 24.5056    
cufflinks 9.09192 0.0 26.4969    
cufflinks 2.808        
cufflinks 1.449        
cufflinks 2.165        
cufflinks 2.536        
cufflinks 3.245        
cufflinks 1.276        
cufflinks 8.643     High High
cufflinks 0.539       Low
cufflinks 3.478        
cufflinks 2.954        
cufflinks 6.735       High
cufflinks 2.151        
cufflinks 6.316        
cufflinks 9.747     High High
cufflinks 1.214        
cufflinks 7.557     High High
cufflinks 0.882       Low

0 Strain