Gene : Glyma.05G040100 G. max Wm82.a2.v1
Defline:  (1 of 30) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  401
Name:  ? Glyma.05G040100 Secondary Identifier:  ? PAC:30527462
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Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G040100 0.5kb upstream 0.5kb upstream 3839 true Chr05: 3566109-3569947 Glycine max
Glyma.05G040100 0.5kb upstream 0.5kb upstream 500 false Chr05: 3569448-3569947 Glycine max
Glyma.05G040100 0.5kb downstream 0.5kb downstream 3839 true Chr05: 3565609-3569447 Glycine max
Glyma.05G040100 0.5kb downstream 0.5kb downstream 500 false Chr05: 3565609-3566108 Glycine max
Glyma.05G040100 1.0kb upstream 1.0kb upstream 4339 true Chr05: 3566109-3570447 Glycine max
Glyma.05G040100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3569448-3570447 Glycine max
Glyma.05G040100 1.0kb downstream 1.0kb downstream 4339 true Chr05: 3565109-3569447 Glycine max
Glyma.05G040100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3565109-3566108 Glycine max
Glyma.05G040100 2.0kb upstream 2.0kb upstream 5339 true Chr05: 3566109-3571447 Glycine max
Glyma.05G040100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3569448-3571447 Glycine max
Glyma.05G040100 2.0kb downstream 2.0kb downstream 5339 true Chr05: 3564109-3569447 Glycine max
Glyma.05G040100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3564109-3566108 Glycine max
Glyma.05G040100 5.0kb upstream 5.0kb upstream 8339 true Chr05: 3566109-3574447 Glycine max
Glyma.05G040100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3569448-3574447 Glycine max
Glyma.05G040100 5.0kb downstream 5.0kb downstream 8339 true Chr05: 3561109-3569447 Glycine max
Glyma.05G040100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3561109-3566108 Glycine max
Glyma.05G040100 10.0kb upstream 10.0kb upstream 13339 true Chr05: 3566109-3579447 Glycine max
Glyma.05G040100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3569448-3579447 Glycine max
Glyma.05G040100 10.0kb downstream 10.0kb downstream 13339 true Chr05: 3556109-3569447 Glycine max
Glyma.05G040100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3556109-3566108 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310361 5265 Fabidae View MSA
124064141 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0169344 0.0 0.0943061 Low Low
cufflinks 3.59417 0.0 18.8794    
cufflinks 0.873775 0.0 5.2633    
cufflinks 3.72076 0.0 16.2814    
cufflinks 1.54167 0.0 10.3713    
cufflinks 61.1373 0.0 255.618 High High
cufflinks 0.165928 0.0 0.654034 Low  
cufflinks 15.0764 0.0 58.6205    
cufflinks 4.12836 0.0 20.874    
cufflinks 1.86       High
cufflinks 0.1        
cufflinks 0.59        
cufflinks 0.815        
cufflinks 0.051     Low Low
cufflinks 0.452        
cufflinks 0.138        
cufflinks 0.446        
cufflinks 0.238        
cufflinks 0.55        
cufflinks 0.082     Low  
cufflinks 0.281        
cufflinks 0.137        
cufflinks 0.162        
cufflinks 0.07       Low
cufflinks 0.079     Low  
cufflinks 5.065       High

0 Strain