Gene : Glyma.05G062200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 Genomic Order:  622
Name:  ? Glyma.05G062200 Secondary Identifier:  ? PAC:30526538
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-6837 Glycine max pathologic  
Gmax PWY-735 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G062200 0.5kb upstream 0.5kb upstream 7174 true Chr05: 5856950-5864123 Glycine max
Glyma.05G062200 0.5kb upstream 0.5kb upstream 500 false Chr05: 5863624-5864123 Glycine max
Glyma.05G062200 0.5kb downstream 0.5kb downstream 7174 true Chr05: 5856450-5863623 Glycine max
Glyma.05G062200 0.5kb downstream 0.5kb downstream 500 false Chr05: 5856450-5856949 Glycine max
Glyma.05G062200 1.0kb upstream 1.0kb upstream 7674 true Chr05: 5856950-5864623 Glycine max
Glyma.05G062200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5863624-5864623 Glycine max
Glyma.05G062200 1.0kb downstream 1.0kb downstream 7674 true Chr05: 5855950-5863623 Glycine max
Glyma.05G062200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5855950-5856949 Glycine max
Glyma.05G062200 2.0kb upstream 2.0kb upstream 8674 true Chr05: 5856950-5865623 Glycine max
Glyma.05G062200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5863624-5865623 Glycine max
Glyma.05G062200 2.0kb downstream 2.0kb downstream 8674 true Chr05: 5854950-5863623 Glycine max
Glyma.05G062200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5854950-5856949 Glycine max
Glyma.05G062200 5.0kb upstream 5.0kb upstream 11674 true Chr05: 5856950-5868623 Glycine max
Glyma.05G062200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5863624-5868623 Glycine max
Glyma.05G062200 5.0kb downstream 5.0kb downstream 11674 true Chr05: 5851950-5863623 Glycine max
Glyma.05G062200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5851950-5856949 Glycine max
Glyma.05G062200 10.0kb upstream 10.0kb upstream 16674 true Chr05: 5856950-5873623 Glycine max
Glyma.05G062200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5863624-5873623 Glycine max
Glyma.05G062200 10.0kb downstream 10.0kb downstream 16674 true Chr05: 5846950-5863623 Glycine max
Glyma.05G062200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5846950-5856949 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309482 5265 Fabidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2539 0.0 48.9998   Low
cufflinks 45.6327 0.0 132.739 High High
cufflinks 26.199 0.0 71.9066 High  
cufflinks 22.0106 0.0 59.6246 High  
cufflinks 32.4602 0.0 90.6576 High  
cufflinks 43.7918 0.0 126.81 High High
cufflinks 19.9323 0.0 53.7012   Low
cufflinks 28.2519 0.0 77.9652 High  
cufflinks 25.5631 0.0 69.9315 High  
cufflinks 11.189     High  
cufflinks 5.091       Low
cufflinks 10.91     High  
cufflinks 15.546     High High
cufflinks 16.838     High High
cufflinks 6.607     High  
cufflinks 9.387     High  
cufflinks 6.472     High  
cufflinks 14.754     High High
cufflinks 25.284     High High
cufflinks 7.566     High  
cufflinks 6.662     High  
cufflinks 7.808     High  
cufflinks 10.777     High  
cufflinks 6.209     High Low
cufflinks 8.671     High  
cufflinks 8.286     High  

0 Strain