Gene : Glyma.05G064600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10809:SF42 - VESICLE-ASSOCIATED PROTEIN 2-1 Genomic Order:  646
Name:  ? Glyma.05G064600 Secondary Identifier:  ? PAC:30524739
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G064600 0.5kb upstream 0.5kb upstream 14615 true Chr05: 6321848-6336462 Glycine max
Glyma.05G064600 0.5kb upstream 0.5kb upstream 500 false Chr05: 6321848-6322347 Glycine max
Glyma.05G064600 0.5kb downstream 0.5kb downstream 14615 true Chr05: 6322348-6336962 Glycine max
Glyma.05G064600 0.5kb downstream 0.5kb downstream 500 false Chr05: 6336463-6336962 Glycine max
Glyma.05G064600 1.0kb upstream 1.0kb upstream 15115 true Chr05: 6321348-6336462 Glycine max
Glyma.05G064600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6321348-6322347 Glycine max
Glyma.05G064600 1.0kb downstream 1.0kb downstream 15115 true Chr05: 6322348-6337462 Glycine max
Glyma.05G064600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6336463-6337462 Glycine max
Glyma.05G064600 2.0kb upstream 2.0kb upstream 16115 true Chr05: 6320348-6336462 Glycine max
Glyma.05G064600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6320348-6322347 Glycine max
Glyma.05G064600 2.0kb downstream 2.0kb downstream 16115 true Chr05: 6322348-6338462 Glycine max
Glyma.05G064600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6336463-6338462 Glycine max
Glyma.05G064600 5.0kb upstream 5.0kb upstream 19115 true Chr05: 6317348-6336462 Glycine max
Glyma.05G064600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6317348-6322347 Glycine max
Glyma.05G064600 5.0kb downstream 5.0kb downstream 19115 true Chr05: 6322348-6341462 Glycine max
Glyma.05G064600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6336463-6341462 Glycine max
Glyma.05G064600 10.0kb upstream 10.0kb upstream 24115 true Chr05: 6312348-6336462 Glycine max
Glyma.05G064600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6312348-6322347 Glycine max
Glyma.05G064600 10.0kb downstream 10.0kb downstream 24115 true Chr05: 6322348-6346462 Glycine max
Glyma.05G064600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6336463-6346462 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314559 5265 Fabidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98377E-4 0.0 0.00575612 Low Low
cufflinks 1.47917 0.0 5.37018    
cufflinks 1.03836 0.0 3.83793    
cufflinks 0.280495 0.0 1.09893    
cufflinks 0.486533 0.0 1.86541    
cufflinks 0.642831 0.0 2.4345    
cufflinks 0.884538 0.0 3.30183    
cufflinks 0.0519194 0.0 0.221168 Low  
cufflinks 0.0787573 0.0 0.32601 Low  
cufflinks 0.005     Low  
cufflinks 0.011     Low  
cufflinks 0.061     Low High
cufflinks 0.014     Low  
cufflinks 0.011     Low  
cufflinks 0.003     Low  
cufflinks 0.01     Low  
cufflinks 0.006     Low  
cufflinks 0.137       High
cufflinks 0.053     Low High
cufflinks 0.001     Low Low
cufflinks 0.009     Low  
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.007     Low  
cufflinks 0.004     Low  
cufflinks 0.008     Low  

0 Strain