Gene : Glyma.05G097800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13847:SF150 - OXIDOREDUCTASE TDA3-RELATED Genomic Order:  978
Name:  ? Glyma.05G097800 Secondary Identifier:  ? PAC:30526053
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G097800 0.5kb upstream 0.5kb upstream 2442 true Chr05: 25827594-25830035 Glycine max
Glyma.05G097800 0.5kb upstream 0.5kb upstream 500 false Chr05: 25829536-25830035 Glycine max
Glyma.05G097800 0.5kb downstream 0.5kb downstream 2442 true Chr05: 25827094-25829535 Glycine max
Glyma.05G097800 0.5kb downstream 0.5kb downstream 500 false Chr05: 25827094-25827593 Glycine max
Glyma.05G097800 1.0kb upstream 1.0kb upstream 2942 true Chr05: 25827594-25830535 Glycine max
Glyma.05G097800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25829536-25830535 Glycine max
Glyma.05G097800 1.0kb downstream 1.0kb downstream 2942 true Chr05: 25826594-25829535 Glycine max
Glyma.05G097800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25826594-25827593 Glycine max
Glyma.05G097800 2.0kb upstream 2.0kb upstream 3942 true Chr05: 25827594-25831535 Glycine max
Glyma.05G097800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25829536-25831535 Glycine max
Glyma.05G097800 2.0kb downstream 2.0kb downstream 3942 true Chr05: 25825594-25829535 Glycine max
Glyma.05G097800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25825594-25827593 Glycine max
Glyma.05G097800 5.0kb upstream 5.0kb upstream 6942 true Chr05: 25827594-25834535 Glycine max
Glyma.05G097800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25829536-25834535 Glycine max
Glyma.05G097800 5.0kb downstream 5.0kb downstream 6942 true Chr05: 25822594-25829535 Glycine max
Glyma.05G097800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25822594-25827593 Glycine max
Glyma.05G097800 10.0kb upstream 10.0kb upstream 11942 true Chr05: 25827594-25839535 Glycine max
Glyma.05G097800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25829536-25839535 Glycine max
Glyma.05G097800 10.0kb downstream 10.0kb downstream 11942 true Chr05: 25817594-25829535 Glycine max
Glyma.05G097800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25817594-25827593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306183 5265 Fabidae View MSA
124065372 5270 Rosid View MSA
123753619 5271 Pentapetalae View MSA
122787005 5272 Eudicot View MSA
122045969 5273 Angiosperm View MSA
121345060 5274 Embryophyte View MSA
123424599 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91058 0.0 14.2227    
cufflinks 3.37083 0.0 10.3265    
cufflinks 2.15383 0.0 7.03865    
cufflinks 2.9725 0.0 9.25631    
cufflinks 0.909421 0.0 3.22636   Low
cufflinks 0.66861 0.0 2.42698   Low
cufflinks 8.649 0.0 23.655   High
cufflinks 2.82654 0.0 8.86583    
cufflinks 0.782989 0.0 2.81468   Low
cufflinks 0.676        
cufflinks 0.195       Low
cufflinks 1.86        
cufflinks 0.232       Low
cufflinks 0.292        
cufflinks 0.25        
cufflinks 2.466       High
cufflinks 0.464        
cufflinks 1.517        
cufflinks 2.918       High
cufflinks 2.477       High
cufflinks 0.206       Low
cufflinks 3.072       High
cufflinks 2.228        
cufflinks 0.137       Low
cufflinks 2.235        
cufflinks 0.356        

0 Strain