Gene : Glyma.05G098600 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  986
Name:  ? Glyma.05G098600 Secondary Identifier:  ? PAC:30525734
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G098600 0.5kb upstream 0.5kb upstream 2763 true Chr05: 26206737-26209499 Glycine max
Glyma.05G098600 0.5kb upstream 0.5kb upstream 500 false Chr05: 26206737-26207236 Glycine max
Glyma.05G098600 0.5kb downstream 0.5kb downstream 2763 true Chr05: 26207237-26209999 Glycine max
Glyma.05G098600 0.5kb downstream 0.5kb downstream 500 false Chr05: 26209500-26209999 Glycine max
Glyma.05G098600 1.0kb upstream 1.0kb upstream 3263 true Chr05: 26206237-26209499 Glycine max
Glyma.05G098600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 26206237-26207236 Glycine max
Glyma.05G098600 1.0kb downstream 1.0kb downstream 3263 true Chr05: 26207237-26210499 Glycine max
Glyma.05G098600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 26209500-26210499 Glycine max
Glyma.05G098600 2.0kb upstream 2.0kb upstream 4263 true Chr05: 26205237-26209499 Glycine max
Glyma.05G098600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 26205237-26207236 Glycine max
Glyma.05G098600 2.0kb downstream 2.0kb downstream 4263 true Chr05: 26207237-26211499 Glycine max
Glyma.05G098600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 26209500-26211499 Glycine max
Glyma.05G098600 5.0kb upstream 5.0kb upstream 7263 true Chr05: 26202237-26209499 Glycine max
Glyma.05G098600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 26202237-26207236 Glycine max
Glyma.05G098600 5.0kb downstream 5.0kb downstream 7263 true Chr05: 26207237-26214499 Glycine max
Glyma.05G098600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 26209500-26214499 Glycine max
Glyma.05G098600 10.0kb upstream 10.0kb upstream 12263 true Chr05: 26197237-26209499 Glycine max
Glyma.05G098600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 26197237-26207236 Glycine max
Glyma.05G098600 10.0kb downstream 10.0kb downstream 12263 true Chr05: 26207237-26219499 Glycine max
Glyma.05G098600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 26209500-26219499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250366 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.04495 0.0 22.0089    
cufflinks 8.97099 0.0 27.0809    
cufflinks 6.49166 0.0 20.4039    
cufflinks 13.7059 0.0 39.0255    
cufflinks 4.12527 0.0 13.8427    
cufflinks 1.33862 0.0 4.92012    
cufflinks 0.0540971 0.0 0.232473 Low Low
cufflinks 2.25752 0.0 8.01352    
cufflinks 1.60388 0.0 5.83378    
cufflinks 1.171        
cufflinks 0.052     Low  
cufflinks 0.58        
cufflinks 0.656        
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.415        
cufflinks 0.146        
cufflinks 1.555        
cufflinks 0.997        
cufflinks 1.531        
cufflinks 0.067        
cufflinks 0.813        
cufflinks 1.284        
cufflinks 0.018     Low Low
cufflinks 0.849        
cufflinks 0.006     Low Low

0 Strain