Gene : Glyma.05G089000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23115//PTHR23115:SF157 - TRANSLATION FACTOR Genomic Order:  890
Name:  ? Glyma.05G089000 Secondary Identifier:  ? PAC:30524749
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G089000 0.5kb upstream 0.5kb upstream 3592 true Chr05: 19280723-19284314 Glycine max
Glyma.05G089000 0.5kb upstream 0.5kb upstream 500 false Chr05: 19280723-19281222 Glycine max
Glyma.05G089000 0.5kb downstream 0.5kb downstream 3592 true Chr05: 19281223-19284814 Glycine max
Glyma.05G089000 0.5kb downstream 0.5kb downstream 500 false Chr05: 19284315-19284814 Glycine max
Glyma.05G089000 1.0kb upstream 1.0kb upstream 4092 true Chr05: 19280223-19284314 Glycine max
Glyma.05G089000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19280223-19281222 Glycine max
Glyma.05G089000 1.0kb downstream 1.0kb downstream 4092 true Chr05: 19281223-19285314 Glycine max
Glyma.05G089000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19284315-19285314 Glycine max
Glyma.05G089000 2.0kb upstream 2.0kb upstream 5092 true Chr05: 19279223-19284314 Glycine max
Glyma.05G089000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19279223-19281222 Glycine max
Glyma.05G089000 2.0kb downstream 2.0kb downstream 5092 true Chr05: 19281223-19286314 Glycine max
Glyma.05G089000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19284315-19286314 Glycine max
Glyma.05G089000 5.0kb upstream 5.0kb upstream 8092 true Chr05: 19276223-19284314 Glycine max
Glyma.05G089000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19276223-19281222 Glycine max
Glyma.05G089000 5.0kb downstream 5.0kb downstream 8092 true Chr05: 19281223-19289314 Glycine max
Glyma.05G089000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19284315-19289314 Glycine max
Glyma.05G089000 10.0kb upstream 10.0kb upstream 13092 true Chr05: 19271223-19284314 Glycine max
Glyma.05G089000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19271223-19281222 Glycine max
Glyma.05G089000 10.0kb downstream 10.0kb downstream 13092 true Chr05: 19281223-19294314 Glycine max
Glyma.05G089000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19284315-19294314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312634 5265 Fabidae View MSA
124072092 5270 Rosid View MSA
123748875 5271 Pentapetalae View MSA
122797636 5272 Eudicot View MSA
122049115 5273 Angiosperm View MSA
121350954 5274 Embryophyte View MSA
123423923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 384.895 0.0 4476.37 High  
cufflinks 485.767 0.0 7002.88 High  
cufflinks 247.604 0.0 2009.09 High Low
cufflinks 470.262 0.0 6650.45 High  
cufflinks 751.204 0.0 16963.7 High High
cufflinks 420.561 0.0 5348.85 High  
cufflinks 683.408 0.0 14014.4 High High
cufflinks 404.4 0.0 5030.09 High  
cufflinks 453.032 0.0 6193.42 High  
cufflinks 118.24     High  
cufflinks 35.597     High Low
cufflinks 113.719     High  
cufflinks 233.831     High High
cufflinks 353.123     High High
cufflinks 54.875     High  
cufflinks 92.03     High  
cufflinks 74.593     High  
cufflinks 133.327     High  
cufflinks 155.687     High  
cufflinks 83.791     High  
cufflinks 52.866     High Low
cufflinks 85.652     High  
cufflinks 101.761     High  
cufflinks 46.414     High Low
cufflinks 91.633     High  
cufflinks 72.211     High  

0 Strain