Gene : Glyma.05G085200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  852
Name:  ? Glyma.05G085200 Secondary Identifier:  ? PAC:30524463
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G085200 0.5kb upstream 0.5kb upstream 3693 true Chr05: 15489208-15492900 Glycine max
Glyma.05G085200 0.5kb upstream 0.5kb upstream 500 false Chr05: 15492401-15492900 Glycine max
Glyma.05G085200 0.5kb downstream 0.5kb downstream 3693 true Chr05: 15488708-15492400 Glycine max
Glyma.05G085200 0.5kb downstream 0.5kb downstream 500 false Chr05: 15488708-15489207 Glycine max
Glyma.05G085200 1.0kb upstream 1.0kb upstream 4193 true Chr05: 15489208-15493400 Glycine max
Glyma.05G085200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 15492401-15493400 Glycine max
Glyma.05G085200 1.0kb downstream 1.0kb downstream 4193 true Chr05: 15488208-15492400 Glycine max
Glyma.05G085200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 15488208-15489207 Glycine max
Glyma.05G085200 2.0kb upstream 2.0kb upstream 5193 true Chr05: 15489208-15494400 Glycine max
Glyma.05G085200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 15492401-15494400 Glycine max
Glyma.05G085200 2.0kb downstream 2.0kb downstream 5193 true Chr05: 15487208-15492400 Glycine max
Glyma.05G085200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 15487208-15489207 Glycine max
Glyma.05G085200 5.0kb upstream 5.0kb upstream 8193 true Chr05: 15489208-15497400 Glycine max
Glyma.05G085200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 15492401-15497400 Glycine max
Glyma.05G085200 5.0kb downstream 5.0kb downstream 8193 true Chr05: 15484208-15492400 Glycine max
Glyma.05G085200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 15484208-15489207 Glycine max
Glyma.05G085200 10.0kb upstream 10.0kb upstream 13193 true Chr05: 15489208-15502400 Glycine max
Glyma.05G085200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 15492401-15502400 Glycine max
Glyma.05G085200 10.0kb downstream 10.0kb downstream 13193 true Chr05: 15479208-15492400 Glycine max
Glyma.05G085200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 15479208-15489207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253627 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.59949 0.0 15.3824    
cufflinks 2.19579 0.0 6.69961    
cufflinks 11.2146 0.0 29.9194   High
cufflinks 5.64348 0.0 15.4501    
cufflinks 2.28679 0.0 6.98115    
cufflinks 0.937018 0.0 3.21181   Low
cufflinks 0.483826 0.0 1.75258   Low
cufflinks 14.3064 0.0 38.2468   High
cufflinks 3.18796 0.0 9.26952    
cufflinks 25.267     High  
cufflinks 29.402     High High
cufflinks 21.933     High  
cufflinks 5.51        
cufflinks 1.119       Low
cufflinks 6.175     High  
cufflinks 9.582     High  
cufflinks 32.131     High High
cufflinks 8.697     High  
cufflinks 2.896       Low
cufflinks 8.276     High  
cufflinks 24.79     High  
cufflinks 6.127        
cufflinks 6.933        
cufflinks 39.639     High High
cufflinks 9.896     High  
cufflinks 20.16     High  

0 Strain