Gene : Glyma.05G112000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED Genomic Order:  1120
Name:  ? Glyma.05G112000 Secondary Identifier:  ? PAC:30524116
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G112000 0.5kb upstream 0.5kb upstream 1525 true Chr05: 29765453-29766977 Glycine max
Glyma.05G112000 0.5kb upstream 0.5kb upstream 500 false Chr05: 29766478-29766977 Glycine max
Glyma.05G112000 0.5kb downstream 0.5kb downstream 1525 true Chr05: 29764953-29766477 Glycine max
Glyma.05G112000 0.5kb downstream 0.5kb downstream 500 false Chr05: 29764953-29765452 Glycine max
Glyma.05G112000 1.0kb upstream 1.0kb upstream 2025 true Chr05: 29765453-29767477 Glycine max
Glyma.05G112000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29766478-29767477 Glycine max
Glyma.05G112000 1.0kb downstream 1.0kb downstream 2025 true Chr05: 29764453-29766477 Glycine max
Glyma.05G112000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29764453-29765452 Glycine max
Glyma.05G112000 2.0kb upstream 2.0kb upstream 3025 true Chr05: 29765453-29768477 Glycine max
Glyma.05G112000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29766478-29768477 Glycine max
Glyma.05G112000 2.0kb downstream 2.0kb downstream 3025 true Chr05: 29763453-29766477 Glycine max
Glyma.05G112000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29763453-29765452 Glycine max
Glyma.05G112000 5.0kb upstream 5.0kb upstream 6025 true Chr05: 29765453-29771477 Glycine max
Glyma.05G112000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29766478-29771477 Glycine max
Glyma.05G112000 5.0kb downstream 5.0kb downstream 6025 true Chr05: 29760453-29766477 Glycine max
Glyma.05G112000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29760453-29765452 Glycine max
Glyma.05G112000 10.0kb upstream 10.0kb upstream 11025 true Chr05: 29765453-29776477 Glycine max
Glyma.05G112000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29766478-29776477 Glycine max
Glyma.05G112000 10.0kb downstream 10.0kb downstream 11025 true Chr05: 29755453-29766477 Glycine max
Glyma.05G112000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29755453-29765452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041492 5273 Angiosperm View MSA
122305361 5265 Fabidae View MSA
124069755 5270 Rosid View MSA
123747649 5271 Pentapetalae View MSA
122796775 5272 Eudicot View MSA
121309859 5274 Embryophyte View MSA
123347503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07768 0.0 3.9711    
cufflinks 0.0247192 0.0 0.112102 Low Low
cufflinks 1.23909 0.0 4.52418    
cufflinks 3.47159 0.0 11.596    
cufflinks 1.84639 0.0 6.56679    
cufflinks 4.33234 0.0 14.1685    
cufflinks 19.4767 0.0 53.0098   High
cufflinks 0.0473659 0.0 0.201978 Low Low
cufflinks 0.122963 0.0 0.495893 Low  
cufflinks 0.13        
cufflinks 1.098       High
cufflinks 1.215       High
cufflinks 0.173        
cufflinks 0.517        
cufflinks 0.901        
cufflinks 0.216        
cufflinks 0.056     Low  
cufflinks 0.011     Low Low
cufflinks 0.015     Low Low
cufflinks 0.387        
cufflinks 0.976       High
cufflinks 0.183        
cufflinks 0.051     Low  
cufflinks 0.749        
cufflinks 0.393        
cufflinks 0.15        

0 Strain