Gene : Glyma.05G113600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1136
Name:  ? Glyma.05G113600 Secondary Identifier:  ? PAC:30525210
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G113600 0.5kb upstream 0.5kb upstream 4421 true Chr05: 30108738-30113158 Glycine max
Glyma.05G113600 0.5kb upstream 0.5kb upstream 500 false Chr05: 30112659-30113158 Glycine max
Glyma.05G113600 0.5kb downstream 0.5kb downstream 4421 true Chr05: 30108238-30112658 Glycine max
Glyma.05G113600 0.5kb downstream 0.5kb downstream 500 false Chr05: 30108238-30108737 Glycine max
Glyma.05G113600 1.0kb upstream 1.0kb upstream 4921 true Chr05: 30108738-30113658 Glycine max
Glyma.05G113600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 30112659-30113658 Glycine max
Glyma.05G113600 1.0kb downstream 1.0kb downstream 4921 true Chr05: 30107738-30112658 Glycine max
Glyma.05G113600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 30107738-30108737 Glycine max
Glyma.05G113600 2.0kb upstream 2.0kb upstream 5921 true Chr05: 30108738-30114658 Glycine max
Glyma.05G113600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 30112659-30114658 Glycine max
Glyma.05G113600 2.0kb downstream 2.0kb downstream 5921 true Chr05: 30106738-30112658 Glycine max
Glyma.05G113600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 30106738-30108737 Glycine max
Glyma.05G113600 5.0kb upstream 5.0kb upstream 8921 true Chr05: 30108738-30117658 Glycine max
Glyma.05G113600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 30112659-30117658 Glycine max
Glyma.05G113600 5.0kb downstream 5.0kb downstream 8921 true Chr05: 30103738-30112658 Glycine max
Glyma.05G113600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 30103738-30108737 Glycine max
Glyma.05G113600 10.0kb upstream 10.0kb upstream 13921 true Chr05: 30108738-30122658 Glycine max
Glyma.05G113600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 30112659-30122658 Glycine max
Glyma.05G113600 10.0kb downstream 10.0kb downstream 13921 true Chr05: 30098738-30112658 Glycine max
Glyma.05G113600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 30098738-30108737 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307392 5265 Fabidae View MSA
124068007 5270 Rosid View MSA
123749839 5271 Pentapetalae View MSA
122786941 5272 Eudicot View MSA
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1779 0.0 49.0183   Low
cufflinks 12.0647 0.0 48.5044   Low
cufflinks 20.7667 0.0 82.6485 High High
cufflinks 15.4589 0.0 58.4159    
cufflinks 11.8884 0.0 48.2031   Low
cufflinks 22.1975 0.0 88.2644   High
cufflinks 18.7043 0.0 77.0378    
cufflinks 15.052 0.0 63.6697    
cufflinks 14.9336 0.0 63.0606    
cufflinks 0.812        
cufflinks 1.224       High
cufflinks 1.536       High
cufflinks 0.913        
cufflinks 0.781        
cufflinks 0.822        
cufflinks 0.87        
cufflinks 0.65       Low
cufflinks 1.287       High
cufflinks 1.012        
cufflinks 1.009        
cufflinks 0.999        
cufflinks 1.042        
cufflinks 0.683       Low
cufflinks 1.232       High
cufflinks 0.916        
cufflinks 0.955        

0 Strain