Gene : Glyma.05G108600 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1086
Name:  ? Glyma.05G108600 Secondary Identifier:  ? PAC:30526567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G108600 0.5kb upstream 0.5kb upstream 4874 true Chr05: 28772713-28777586 Glycine max
Glyma.05G108600 0.5kb upstream 0.5kb upstream 500 false Chr05: 28772713-28773212 Glycine max
Glyma.05G108600 0.5kb downstream 0.5kb downstream 4874 true Chr05: 28773213-28778086 Glycine max
Glyma.05G108600 0.5kb downstream 0.5kb downstream 500 false Chr05: 28777587-28778086 Glycine max
Glyma.05G108600 1.0kb upstream 1.0kb upstream 5374 true Chr05: 28772213-28777586 Glycine max
Glyma.05G108600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28772213-28773212 Glycine max
Glyma.05G108600 1.0kb downstream 1.0kb downstream 5374 true Chr05: 28773213-28778586 Glycine max
Glyma.05G108600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28777587-28778586 Glycine max
Glyma.05G108600 2.0kb upstream 2.0kb upstream 6374 true Chr05: 28771213-28777586 Glycine max
Glyma.05G108600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28771213-28773212 Glycine max
Glyma.05G108600 2.0kb downstream 2.0kb downstream 6374 true Chr05: 28773213-28779586 Glycine max
Glyma.05G108600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28777587-28779586 Glycine max
Glyma.05G108600 5.0kb upstream 5.0kb upstream 9374 true Chr05: 28768213-28777586 Glycine max
Glyma.05G108600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28768213-28773212 Glycine max
Glyma.05G108600 5.0kb downstream 5.0kb downstream 9374 true Chr05: 28773213-28782586 Glycine max
Glyma.05G108600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28777587-28782586 Glycine max
Glyma.05G108600 10.0kb upstream 10.0kb upstream 14374 true Chr05: 28763213-28777586 Glycine max
Glyma.05G108600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28763213-28773212 Glycine max
Glyma.05G108600 10.0kb downstream 10.0kb downstream 14374 true Chr05: 28773213-28787586 Glycine max
Glyma.05G108600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28777587-28787586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308902 5265 Fabidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.28798 0.0 1.36397   Low
cufflinks 14.1632 0.0 59.0954   High
cufflinks 0.846311 0.0 4.51395    
cufflinks 2.32981 0.0 14.0817    
cufflinks 1.32535 0.0 6.81921    
cufflinks 0.888842 0.0 4.79599    
cufflinks 4.48575 0.0 18.1359    
cufflinks 8.58584 0.0 38.8778   High
cufflinks 1.75058 0.0 8.07959    
cufflinks 1.17        
cufflinks 0.068       Low
cufflinks 0.394        
cufflinks 0.222        
cufflinks 0.013     Low Low
cufflinks 0.076       Low
cufflinks 1.024        
cufflinks 0.246        
cufflinks 0.663        
cufflinks 3.127       High
cufflinks 0.56        
cufflinks 0.42        
cufflinks 0.851        
cufflinks 1.679       High
cufflinks 0.105        
cufflinks 0.765        
cufflinks 0.232        

0 Strain