Gene : Glyma.05G108800 G. max Wm82.a2.v1
Genomic Order:  1088 Name:  ? Glyma.05G108800
Secondary Identifier:  ? PAC:30524934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G108800 0.5kb upstream 0.5kb upstream 11246 true Chr05: 28818980-28830225 Glycine max
Glyma.05G108800 0.5kb upstream 0.5kb upstream 500 false Chr05: 28818980-28819479 Glycine max
Glyma.05G108800 0.5kb downstream 0.5kb downstream 11246 true Chr05: 28819480-28830725 Glycine max
Glyma.05G108800 0.5kb downstream 0.5kb downstream 500 false Chr05: 28830226-28830725 Glycine max
Glyma.05G108800 1.0kb upstream 1.0kb upstream 11746 true Chr05: 28818480-28830225 Glycine max
Glyma.05G108800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28818480-28819479 Glycine max
Glyma.05G108800 1.0kb downstream 1.0kb downstream 11746 true Chr05: 28819480-28831225 Glycine max
Glyma.05G108800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28830226-28831225 Glycine max
Glyma.05G108800 2.0kb upstream 2.0kb upstream 12746 true Chr05: 28817480-28830225 Glycine max
Glyma.05G108800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28817480-28819479 Glycine max
Glyma.05G108800 2.0kb downstream 2.0kb downstream 12746 true Chr05: 28819480-28832225 Glycine max
Glyma.05G108800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28830226-28832225 Glycine max
Glyma.05G108800 5.0kb upstream 5.0kb upstream 15746 true Chr05: 28814480-28830225 Glycine max
Glyma.05G108800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28814480-28819479 Glycine max
Glyma.05G108800 5.0kb downstream 5.0kb downstream 15746 true Chr05: 28819480-28835225 Glycine max
Glyma.05G108800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28830226-28835225 Glycine max
Glyma.05G108800 10.0kb upstream 10.0kb upstream 20746 true Chr05: 28809480-28830225 Glycine max
Glyma.05G108800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28809480-28819479 Glycine max
Glyma.05G108800 10.0kb downstream 10.0kb downstream 20746 true Chr05: 28819480-28840225 Glycine max
Glyma.05G108800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28830226-28840225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314102 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5176 0.0 19.5107    
cufflinks 8.94232 0.0 25.669    
cufflinks 4.01975 0.0 12.8344   Low
cufflinks 13.734 0.0 37.7179    
cufflinks 24.8156 0.0 66.3323 High  
cufflinks 47.3198 0.0 127.676 High High
cufflinks 8.59352 0.0 24.8113    
cufflinks 25.6306 0.0 68.4561 High  
cufflinks 15.69 0.0 42.7442    
cufflinks 2.438       High
cufflinks 0.636        
cufflinks 0.656        
cufflinks 3.212       High
cufflinks 4.061       High
cufflinks 0.333       Low
cufflinks 0.628        
cufflinks 1.24        
cufflinks 1.444        
cufflinks 0.882        
cufflinks 0.411       Low
cufflinks 0.945        
cufflinks 0.521        
cufflinks 0.77        
cufflinks 0.91        
cufflinks 0.437       Low
cufflinks 1.291        

0 Strain