Gene : Glyma.05G104300 G. max Wm82.a2.v1
Defline:  (1 of 5) PF04419//PF12907 - 4F5 protein family (4F5) // Zinc-binding (zf-met2) Genomic Order:  1043
Name:  ? Glyma.05G104300 Secondary Identifier:  ? PAC:30523918
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G104300 0.5kb upstream 0.5kb upstream 2449 true Chr05: 27726288-27728736 Glycine max
Glyma.05G104300 0.5kb upstream 0.5kb upstream 500 false Chr05: 27728237-27728736 Glycine max
Glyma.05G104300 0.5kb downstream 0.5kb downstream 2449 true Chr05: 27725788-27728236 Glycine max
Glyma.05G104300 0.5kb downstream 0.5kb downstream 500 false Chr05: 27725788-27726287 Glycine max
Glyma.05G104300 1.0kb upstream 1.0kb upstream 2949 true Chr05: 27726288-27729236 Glycine max
Glyma.05G104300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 27728237-27729236 Glycine max
Glyma.05G104300 1.0kb downstream 1.0kb downstream 2949 true Chr05: 27725288-27728236 Glycine max
Glyma.05G104300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 27725288-27726287 Glycine max
Glyma.05G104300 2.0kb upstream 2.0kb upstream 3949 true Chr05: 27726288-27730236 Glycine max
Glyma.05G104300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 27728237-27730236 Glycine max
Glyma.05G104300 2.0kb downstream 2.0kb downstream 3949 true Chr05: 27724288-27728236 Glycine max
Glyma.05G104300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 27724288-27726287 Glycine max
Glyma.05G104300 5.0kb upstream 5.0kb upstream 6949 true Chr05: 27726288-27733236 Glycine max
Glyma.05G104300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 27728237-27733236 Glycine max
Glyma.05G104300 5.0kb downstream 5.0kb downstream 6949 true Chr05: 27721288-27728236 Glycine max
Glyma.05G104300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 27721288-27726287 Glycine max
Glyma.05G104300 10.0kb upstream 10.0kb upstream 11949 true Chr05: 27726288-27738236 Glycine max
Glyma.05G104300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 27728237-27738236 Glycine max
Glyma.05G104300 10.0kb downstream 10.0kb downstream 11949 true Chr05: 27716288-27728236 Glycine max
Glyma.05G104300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 27716288-27726287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304406 5265 Fabidae View MSA
124066852 5270 Rosid View MSA
123751262 5271 Pentapetalae View MSA
122792362 5272 Eudicot View MSA
122042016 5273 Angiosperm View MSA
121349419 5274 Embryophyte View MSA
123425398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.1926 0.0 120.714 High  
cufflinks 34.7065 0.0 93.32 High  
cufflinks 117.654 0.0 326.953 High High
cufflinks 35.62 0.0 95.6796 High  
cufflinks 31.3901 0.0 84.8554 High Low
cufflinks 64.0865 0.0 171.322 High  
cufflinks 74.9305 0.0 201.077 High  
cufflinks 42.7275 0.0 114.181 High  
cufflinks 53.4958 0.0 142.734 High  
cufflinks 9.144     High  
cufflinks 29.896     High High
cufflinks 19.989     High High
cufflinks 7.249     High  
cufflinks 6.73     High Low
cufflinks 23.087     High High
cufflinks 7.767     High  
cufflinks 13.063     High  
cufflinks 12.113     High  
cufflinks 8.595     High  
cufflinks 6.711       Low
cufflinks 17.097     High  
cufflinks 7.027        
cufflinks 7.046        
cufflinks 29.135     High High
cufflinks 7.779     High  
cufflinks 15.22     High  

0 Strain