Gene : Glyma.05G120800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22951//PTHR22951:SF12 - CLATHRIN ASSEMBLY PROTEIN Genomic Order:  1208
Name:  ? Glyma.05G120800 Secondary Identifier:  ? PAC:30525097
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G120800 0.5kb upstream 0.5kb upstream 4558 true Chr05: 31370892-31375449 Glycine max
Glyma.05G120800 0.5kb upstream 0.5kb upstream 500 false Chr05: 31374950-31375449 Glycine max
Glyma.05G120800 0.5kb downstream 0.5kb downstream 4558 true Chr05: 31370392-31374949 Glycine max
Glyma.05G120800 0.5kb downstream 0.5kb downstream 500 false Chr05: 31370392-31370891 Glycine max
Glyma.05G120800 1.0kb upstream 1.0kb upstream 5058 true Chr05: 31370892-31375949 Glycine max
Glyma.05G120800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31374950-31375949 Glycine max
Glyma.05G120800 1.0kb downstream 1.0kb downstream 5058 true Chr05: 31369892-31374949 Glycine max
Glyma.05G120800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31369892-31370891 Glycine max
Glyma.05G120800 2.0kb upstream 2.0kb upstream 6058 true Chr05: 31370892-31376949 Glycine max
Glyma.05G120800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31374950-31376949 Glycine max
Glyma.05G120800 2.0kb downstream 2.0kb downstream 6058 true Chr05: 31368892-31374949 Glycine max
Glyma.05G120800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31368892-31370891 Glycine max
Glyma.05G120800 5.0kb upstream 5.0kb upstream 9058 true Chr05: 31370892-31379949 Glycine max
Glyma.05G120800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31374950-31379949 Glycine max
Glyma.05G120800 5.0kb downstream 5.0kb downstream 9058 true Chr05: 31365892-31374949 Glycine max
Glyma.05G120800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31365892-31370891 Glycine max
Glyma.05G120800 10.0kb upstream 10.0kb upstream 14058 true Chr05: 31370892-31384949 Glycine max
Glyma.05G120800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31374950-31384949 Glycine max
Glyma.05G120800 10.0kb downstream 10.0kb downstream 14058 true Chr05: 31360892-31374949 Glycine max
Glyma.05G120800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31360892-31370891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255032 5265 Fabidae View MSA
123996929 5270 Rosid View MSA
123739341 5271 Pentapetalae View MSA
122788140 5272 Eudicot View MSA
122050548 5273 Angiosperm View MSA
123428889 5275 Viridiplantae View MSA
121311984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49136 0.0 12.4201    
cufflinks 2.5999 0.0 12.7188    
cufflinks 7.87882 0.0 24.9966   High
cufflinks 1.43509 0.0 6.98077   Low
cufflinks 5.5114 0.0 30.1772    
cufflinks 4.7599 0.0 24.5619    
cufflinks 5.24653 0.0 31.9702    
cufflinks 2.61008 0.0 12.4837    
cufflinks 3.09616 0.0 16.3402    
cufflinks 0.007     Low  
cufflinks 0.013     Low  
cufflinks 1.893       High
cufflinks 0.041     Low  
cufflinks 0.046     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 3.114       High
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  

0 Strain