Gene : Glyma.05G123000 G. max Wm82.a2.v1
Defline:  (1 of 185) PF03106 - WRKY DNA -binding domain (WRKY) Genomic Order:  1230
Name:  ? Glyma.05G123000 Secondary Identifier:  ? PAC:30523882
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G123000 0.5kb upstream 0.5kb upstream 3589 true Chr05: 31671737-31675325 Glycine max
Glyma.05G123000 0.5kb upstream 0.5kb upstream 500 false Chr05: 31671737-31672236 Glycine max
Glyma.05G123000 0.5kb downstream 0.5kb downstream 3589 true Chr05: 31672237-31675825 Glycine max
Glyma.05G123000 0.5kb downstream 0.5kb downstream 500 false Chr05: 31675326-31675825 Glycine max
Glyma.05G123000 1.0kb upstream 1.0kb upstream 4089 true Chr05: 31671237-31675325 Glycine max
Glyma.05G123000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31671237-31672236 Glycine max
Glyma.05G123000 1.0kb downstream 1.0kb downstream 4089 true Chr05: 31672237-31676325 Glycine max
Glyma.05G123000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31675326-31676325 Glycine max
Glyma.05G123000 2.0kb upstream 2.0kb upstream 5089 true Chr05: 31670237-31675325 Glycine max
Glyma.05G123000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31670237-31672236 Glycine max
Glyma.05G123000 2.0kb downstream 2.0kb downstream 5089 true Chr05: 31672237-31677325 Glycine max
Glyma.05G123000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31675326-31677325 Glycine max
Glyma.05G123000 5.0kb upstream 5.0kb upstream 8089 true Chr05: 31667237-31675325 Glycine max
Glyma.05G123000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31667237-31672236 Glycine max
Glyma.05G123000 5.0kb downstream 5.0kb downstream 8089 true Chr05: 31672237-31680325 Glycine max
Glyma.05G123000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31675326-31680325 Glycine max
Glyma.05G123000 10.0kb upstream 10.0kb upstream 13089 true Chr05: 31662237-31675325 Glycine max
Glyma.05G123000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31662237-31672236 Glycine max
Glyma.05G123000 10.0kb downstream 10.0kb downstream 13089 true Chr05: 31672237-31685325 Glycine max
Glyma.05G123000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31675326-31685325 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304094 5265 Fabidae View MSA
124064094 5270 Rosid View MSA
123741240 5271 Pentapetalae View MSA
122792688 5272 Eudicot View MSA
122044544 5273 Angiosperm View MSA
121310308 5274 Embryophyte View MSA
123347826 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.61295 0.0 2.80325    
cufflinks 1.51624 0.0 5.6882    
cufflinks 0.618053 0.0 2.79096    
cufflinks 0.75817 0.0 3.34027    
cufflinks 7.09915 0.0 22.9823    
cufflinks 100.575 0.0 498.866 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.390883 0.0 1.91641    
cufflinks 9.27526 0.0 28.7069    
cufflinks 0.135       Low
cufflinks 6.895     High High
cufflinks 0.432        
cufflinks 5.836       High
cufflinks 3.669        
cufflinks 0.59        
cufflinks 0.355        
cufflinks 2.577        
cufflinks 0.14       Low
cufflinks 0.852        
cufflinks 0.347        
cufflinks 5.949     High High
cufflinks 0.4        
cufflinks 0.367        
cufflinks 13.097     High High
cufflinks 0.338        
cufflinks 3.375        

0 Strain