Gene : Glyma.05G123400 G. max Wm82.a2.v1
Defline:  (1 of 25) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  1234
Name:  ? Glyma.05G123400 Secondary Identifier:  ? PAC:30526424
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G123400 0.5kb upstream 0.5kb upstream 1703 true Chr05: 31712033-31713735 Glycine max
Glyma.05G123400 0.5kb upstream 0.5kb upstream 500 false Chr05: 31712033-31712532 Glycine max
Glyma.05G123400 0.5kb downstream 0.5kb downstream 1703 true Chr05: 31712533-31714235 Glycine max
Glyma.05G123400 0.5kb downstream 0.5kb downstream 500 false Chr05: 31713736-31714235 Glycine max
Glyma.05G123400 1.0kb upstream 1.0kb upstream 2203 true Chr05: 31711533-31713735 Glycine max
Glyma.05G123400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31711533-31712532 Glycine max
Glyma.05G123400 1.0kb downstream 1.0kb downstream 2203 true Chr05: 31712533-31714735 Glycine max
Glyma.05G123400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31713736-31714735 Glycine max
Glyma.05G123400 2.0kb upstream 2.0kb upstream 3203 true Chr05: 31710533-31713735 Glycine max
Glyma.05G123400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31710533-31712532 Glycine max
Glyma.05G123400 2.0kb downstream 2.0kb downstream 3203 true Chr05: 31712533-31715735 Glycine max
Glyma.05G123400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31713736-31715735 Glycine max
Glyma.05G123400 5.0kb upstream 5.0kb upstream 6203 true Chr05: 31707533-31713735 Glycine max
Glyma.05G123400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31707533-31712532 Glycine max
Glyma.05G123400 5.0kb downstream 5.0kb downstream 6203 true Chr05: 31712533-31718735 Glycine max
Glyma.05G123400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31713736-31718735 Glycine max
Glyma.05G123400 10.0kb upstream 10.0kb upstream 11203 true Chr05: 31702533-31713735 Glycine max
Glyma.05G123400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31702533-31712532 Glycine max
Glyma.05G123400 10.0kb downstream 10.0kb downstream 11203 true Chr05: 31712533-31723735 Glycine max
Glyma.05G123400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31713736-31723735 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310489 5265 Fabidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.969936 0.0 3.54422    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.333362 0.0 1.28625   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.58073 0.0 2.17371    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.08506 0.0 3.9444   High
cufflinks 0.564941 0.0 2.12244    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.073        
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.178       High
cufflinks 0.055     Low  
cufflinks 0.163       High
cufflinks 0.088     Low  
cufflinks 0.062        
cufflinks 0.175       High
cufflinks 0.092        

0 Strain