Gene : Glyma.05G117900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR36080:SF1 - DBJ Genomic Order:  1179
Name:  ? Glyma.05G117900 Secondary Identifier:  ? PAC:30525624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G117900 0.5kb upstream 0.5kb upstream 1793 true Chr05: 31089691-31091483 Glycine max
Glyma.05G117900 0.5kb upstream 0.5kb upstream 500 false Chr05: 31090984-31091483 Glycine max
Glyma.05G117900 0.5kb downstream 0.5kb downstream 1793 true Chr05: 31089191-31090983 Glycine max
Glyma.05G117900 0.5kb downstream 0.5kb downstream 500 false Chr05: 31089191-31089690 Glycine max
Glyma.05G117900 1.0kb upstream 1.0kb upstream 2293 true Chr05: 31089691-31091983 Glycine max
Glyma.05G117900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31090984-31091983 Glycine max
Glyma.05G117900 1.0kb downstream 1.0kb downstream 2293 true Chr05: 31088691-31090983 Glycine max
Glyma.05G117900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31088691-31089690 Glycine max
Glyma.05G117900 2.0kb upstream 2.0kb upstream 3293 true Chr05: 31089691-31092983 Glycine max
Glyma.05G117900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31090984-31092983 Glycine max
Glyma.05G117900 2.0kb downstream 2.0kb downstream 3293 true Chr05: 31087691-31090983 Glycine max
Glyma.05G117900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31087691-31089690 Glycine max
Glyma.05G117900 5.0kb upstream 5.0kb upstream 6293 true Chr05: 31089691-31095983 Glycine max
Glyma.05G117900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31090984-31095983 Glycine max
Glyma.05G117900 5.0kb downstream 5.0kb downstream 6293 true Chr05: 31084691-31090983 Glycine max
Glyma.05G117900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31084691-31089690 Glycine max
Glyma.05G117900 10.0kb upstream 10.0kb upstream 11293 true Chr05: 31089691-31100983 Glycine max
Glyma.05G117900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31090984-31100983 Glycine max
Glyma.05G117900 10.0kb downstream 10.0kb downstream 11293 true Chr05: 31079691-31090983 Glycine max
Glyma.05G117900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31079691-31089690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300442 5265 Fabidae View MSA
124066337 5270 Rosid View MSA
123744862 5271 Pentapetalae View MSA
122787183 5272 Eudicot View MSA
122046943 5273 Angiosperm View MSA
121344014 5274 Embryophyte View MSA
123425570 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.531 0.0 45.0389    
cufflinks 11.9168 0.0 33.3398   Low
cufflinks 10.8478 0.0 30.7836   Low
cufflinks 15.1054 0.0 41.423    
cufflinks 14.7703 0.0 40.4176    
cufflinks 13.2928 0.0 36.7587    
cufflinks 19.7801 0.0 53.3591   High
cufflinks 15.8425 0.0 43.2716    
cufflinks 13.2244 0.0 36.5756    
cufflinks 10.448     High  
cufflinks 16.292     High  
cufflinks 9.853     High  
cufflinks 6.498       Low
cufflinks 8.537     High  
cufflinks 10.221     High  
cufflinks 16.254     High  
cufflinks 8.069     High Low
cufflinks 10.872     High  
cufflinks 8.014     High Low
cufflinks 17.993     High High
cufflinks 16.905     High High
cufflinks 18.732     High High
cufflinks 8.456     High  
cufflinks 17.006     High High
cufflinks 15.074     High  
cufflinks 14.412     High  

0 Strain