Gene : Glyma.05G141600 G. max Wm82.a2.v1
Genomic Order:  1416 Name:  ? Glyma.05G141600
Secondary Identifier:  ? PAC:30525936
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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G141600 0.5kb upstream 0.5kb upstream 1375 true Chr05: 33489327-33490701 Glycine max
Glyma.05G141600 0.5kb upstream 0.5kb upstream 500 false Chr05: 33489327-33489826 Glycine max
Glyma.05G141600 0.5kb downstream 0.5kb downstream 1375 true Chr05: 33489827-33491201 Glycine max
Glyma.05G141600 0.5kb downstream 0.5kb downstream 500 false Chr05: 33490702-33491201 Glycine max
Glyma.05G141600 1.0kb upstream 1.0kb upstream 1875 true Chr05: 33488827-33490701 Glycine max
Glyma.05G141600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33488827-33489826 Glycine max
Glyma.05G141600 1.0kb downstream 1.0kb downstream 1875 true Chr05: 33489827-33491701 Glycine max
Glyma.05G141600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33490702-33491701 Glycine max
Glyma.05G141600 2.0kb upstream 2.0kb upstream 2875 true Chr05: 33487827-33490701 Glycine max
Glyma.05G141600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33487827-33489826 Glycine max
Glyma.05G141600 2.0kb downstream 2.0kb downstream 2875 true Chr05: 33489827-33492701 Glycine max
Glyma.05G141600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33490702-33492701 Glycine max
Glyma.05G141600 5.0kb upstream 5.0kb upstream 5875 true Chr05: 33484827-33490701 Glycine max
Glyma.05G141600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33484827-33489826 Glycine max
Glyma.05G141600 5.0kb downstream 5.0kb downstream 5875 true Chr05: 33489827-33495701 Glycine max
Glyma.05G141600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33490702-33495701 Glycine max
Glyma.05G141600 10.0kb upstream 10.0kb upstream 10875 true Chr05: 33479827-33490701 Glycine max
Glyma.05G141600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33479827-33489826 Glycine max
Glyma.05G141600 10.0kb downstream 10.0kb downstream 10875 true Chr05: 33489827-33500701 Glycine max
Glyma.05G141600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33490702-33500701 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313209 5265 Fabidae View MSA
124060649 5270 Rosid View MSA
123750767 5271 Pentapetalae View MSA
122796138 5272 Eudicot View MSA
122051041 5273 Angiosperm View MSA
121312263 5274 Embryophyte View MSA
123349452 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0366853 0.0 0.16591 Low Low
cufflinks 50.7819 0.0 135.488 High High
cufflinks 3.06478 0.0 10.7825    
cufflinks 5.6355 0.0 18.6089    
cufflinks 2.01175 0.0 7.30492    
cufflinks 1.53871 0.0 5.6711    
cufflinks 32.2218 0.0 87.0367 High High
cufflinks 1.94493 0.0 7.0624    
cufflinks 0.635874 0.0 2.43966    
cufflinks 2.344        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.22        
cufflinks 0.282        
cufflinks 0.389        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.444        
cufflinks 0.016     Low Low
cufflinks 2.742        
cufflinks 20.704     High High
cufflinks 2.071        
cufflinks 0.02     Low Low
cufflinks 3.339        
cufflinks 8.135     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.753        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain