Gene : Glyma.05G135000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00580//PF13087//PF13245 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // AAA domain (AAA_12) // Part of AAA domain (AAA_19) Genomic Order:  1350
Name:  ? Glyma.05G135000 Secondary Identifier:  ? PAC:30524136
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G135000 0.5kb upstream 0.5kb upstream 13273 true Chr05: 32741649-32754921 Glycine max
Glyma.05G135000 0.5kb upstream 0.5kb upstream 500 false Chr05: 32741649-32742148 Glycine max
Glyma.05G135000 0.5kb downstream 0.5kb downstream 13273 true Chr05: 32742149-32755421 Glycine max
Glyma.05G135000 0.5kb downstream 0.5kb downstream 500 false Chr05: 32754922-32755421 Glycine max
Glyma.05G135000 1.0kb upstream 1.0kb upstream 13773 true Chr05: 32741149-32754921 Glycine max
Glyma.05G135000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32741149-32742148 Glycine max
Glyma.05G135000 1.0kb downstream 1.0kb downstream 13773 true Chr05: 32742149-32755921 Glycine max
Glyma.05G135000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32754922-32755921 Glycine max
Glyma.05G135000 2.0kb upstream 2.0kb upstream 14773 true Chr05: 32740149-32754921 Glycine max
Glyma.05G135000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32740149-32742148 Glycine max
Glyma.05G135000 2.0kb downstream 2.0kb downstream 14773 true Chr05: 32742149-32756921 Glycine max
Glyma.05G135000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32754922-32756921 Glycine max
Glyma.05G135000 5.0kb upstream 5.0kb upstream 17773 true Chr05: 32737149-32754921 Glycine max
Glyma.05G135000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32737149-32742148 Glycine max
Glyma.05G135000 5.0kb downstream 5.0kb downstream 17773 true Chr05: 32742149-32759921 Glycine max
Glyma.05G135000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32754922-32759921 Glycine max
Glyma.05G135000 10.0kb upstream 10.0kb upstream 22773 true Chr05: 32732149-32754921 Glycine max
Glyma.05G135000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32732149-32742148 Glycine max
Glyma.05G135000 10.0kb downstream 10.0kb downstream 22773 true Chr05: 32742149-32764921 Glycine max
Glyma.05G135000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32754922-32764921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313084 5265 Fabidae View MSA
124072227 5270 Rosid View MSA
123753543 5271 Pentapetalae View MSA
122797869 5272 Eudicot View MSA
122048393 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348032 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0993 0.0 3.16973    
cufflinks 2.18282 0.0 5.90898    
cufflinks 2.76643 0.0 7.40517    
cufflinks 2.57732 0.0 6.92287    
cufflinks 1.04752 0.0 3.04767    
cufflinks 0.354157 0.0 1.18963   Low
cufflinks 2.44801 0.0 6.60545    
cufflinks 1.72552 0.0 4.74581    
cufflinks 3.78811 0.0 10.1062   High
cufflinks 1.729        
cufflinks 5.561     High High
cufflinks 3.582        
cufflinks 2.118        
cufflinks 1.249        
cufflinks 2.489        
cufflinks 0.926       Low
cufflinks 1.598        
cufflinks 3.224        
cufflinks 3.263        
cufflinks 1.28        
cufflinks 4.558       High
cufflinks 1.629        
cufflinks 1.098       Low
cufflinks 5.748       High
cufflinks 0.984       Low
cufflinks 4.656       High

0 Strain