Gene : Glyma.05G135900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31142:SF3 - PROTEIN TOM THREE HOMOLOG 1-RELATED Genomic Order:  1359
Name:  ? Glyma.05G135900 Secondary Identifier:  ? PAC:30524975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G135900 0.5kb upstream 0.5kb upstream 6824 true Chr05: 32825331-32832154 Glycine max
Glyma.05G135900 0.5kb upstream 0.5kb upstream 500 false Chr05: 32831655-32832154 Glycine max
Glyma.05G135900 0.5kb downstream 0.5kb downstream 6824 true Chr05: 32824831-32831654 Glycine max
Glyma.05G135900 0.5kb downstream 0.5kb downstream 500 false Chr05: 32824831-32825330 Glycine max
Glyma.05G135900 1.0kb upstream 1.0kb upstream 7324 true Chr05: 32825331-32832654 Glycine max
Glyma.05G135900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32831655-32832654 Glycine max
Glyma.05G135900 1.0kb downstream 1.0kb downstream 7324 true Chr05: 32824331-32831654 Glycine max
Glyma.05G135900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32824331-32825330 Glycine max
Glyma.05G135900 2.0kb upstream 2.0kb upstream 8324 true Chr05: 32825331-32833654 Glycine max
Glyma.05G135900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32831655-32833654 Glycine max
Glyma.05G135900 2.0kb downstream 2.0kb downstream 8324 true Chr05: 32823331-32831654 Glycine max
Glyma.05G135900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32823331-32825330 Glycine max
Glyma.05G135900 5.0kb upstream 5.0kb upstream 11324 true Chr05: 32825331-32836654 Glycine max
Glyma.05G135900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32831655-32836654 Glycine max
Glyma.05G135900 5.0kb downstream 5.0kb downstream 11324 true Chr05: 32820331-32831654 Glycine max
Glyma.05G135900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32820331-32825330 Glycine max
Glyma.05G135900 10.0kb upstream 10.0kb upstream 16324 true Chr05: 32825331-32841654 Glycine max
Glyma.05G135900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32831655-32841654 Glycine max
Glyma.05G135900 10.0kb downstream 10.0kb downstream 16324 true Chr05: 32815331-32831654 Glycine max
Glyma.05G135900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32815331-32825330 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311267 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.5906 0.0 327.097 High High
cufflinks 52.3347 0.0 218.362 High  
cufflinks 45.1776 0.0 183.183 High Low
cufflinks 49.8546 0.0 207.447 High  
cufflinks 58.6336 0.0 251.444 High  
cufflinks 50.366 0.0 210.304 High  
cufflinks 59.9737 0.0 257.709 High  
cufflinks 74.5829 0.0 338.397 High High
cufflinks 57.0516 0.0 243.096 High  
cufflinks 2.327        
cufflinks 3.17       High
cufflinks 1.72       Low
cufflinks 2.05        
cufflinks 2.356        
cufflinks 3.349       High
cufflinks 2.282        
cufflinks 2.504        
cufflinks 2.36        
cufflinks 2.35        
cufflinks 3.043        
cufflinks 2.986        
cufflinks 2.765        
cufflinks 1.73       Low
cufflinks 3.526       High
cufflinks 2.375        
cufflinks 1.98       Low

0 Strain