Gene : Glyma.05G137100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  1371
Name:  ? Glyma.05G137100 Secondary Identifier:  ? PAC:30525010
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G137100 0.5kb upstream 0.5kb upstream 2576 true Chr05: 32976910-32979485 Glycine max
Glyma.05G137100 0.5kb upstream 0.5kb upstream 500 false Chr05: 32976910-32977409 Glycine max
Glyma.05G137100 0.5kb downstream 0.5kb downstream 2576 true Chr05: 32977410-32979985 Glycine max
Glyma.05G137100 0.5kb downstream 0.5kb downstream 500 false Chr05: 32979486-32979985 Glycine max
Glyma.05G137100 1.0kb upstream 1.0kb upstream 3076 true Chr05: 32976410-32979485 Glycine max
Glyma.05G137100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32976410-32977409 Glycine max
Glyma.05G137100 1.0kb downstream 1.0kb downstream 3076 true Chr05: 32977410-32980485 Glycine max
Glyma.05G137100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32979486-32980485 Glycine max
Glyma.05G137100 2.0kb upstream 2.0kb upstream 4076 true Chr05: 32975410-32979485 Glycine max
Glyma.05G137100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32975410-32977409 Glycine max
Glyma.05G137100 2.0kb downstream 2.0kb downstream 4076 true Chr05: 32977410-32981485 Glycine max
Glyma.05G137100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32979486-32981485 Glycine max
Glyma.05G137100 5.0kb upstream 5.0kb upstream 7076 true Chr05: 32972410-32979485 Glycine max
Glyma.05G137100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32972410-32977409 Glycine max
Glyma.05G137100 5.0kb downstream 5.0kb downstream 7076 true Chr05: 32977410-32984485 Glycine max
Glyma.05G137100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32979486-32984485 Glycine max
Glyma.05G137100 10.0kb upstream 10.0kb upstream 12076 true Chr05: 32967410-32979485 Glycine max
Glyma.05G137100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32967410-32977409 Glycine max
Glyma.05G137100 10.0kb downstream 10.0kb downstream 12076 true Chr05: 32977410-32989485 Glycine max
Glyma.05G137100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32979486-32989485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299711 5265 Fabidae View MSA
124073198 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.96703 0.0 20.1416   Low
cufflinks 12.3084 0.0 33.6708    
cufflinks 7.13062 0.0 20.5634   Low
cufflinks 9.63837 0.0 26.8662    
cufflinks 14.4976 0.0 39.2359    
cufflinks 16.5089 0.0 44.409   High
cufflinks 15.7819 0.0 42.5497   High
cufflinks 8.5981 0.0 24.2623    
cufflinks 9.74544 0.0 27.1479    
cufflinks 7.978     High  
cufflinks 8.763     High  
cufflinks 6.523        
cufflinks 8.737     High  
cufflinks 10.552     High  
cufflinks 5.194     High Low
cufflinks 7.182     High  
cufflinks 12.242     High High
cufflinks 8.773     High  
cufflinks 10.012     High  
cufflinks 5.926       Low
cufflinks 9.626     High  
cufflinks 6.567        
cufflinks 9.601     High  
cufflinks 9.745     High  
cufflinks 5.574       Low
cufflinks 13.216     High High

0 Strain