Gene : Glyma.05G132300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1323
Name:  ? Glyma.05G132300 Secondary Identifier:  ? PAC:30526221
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G132300 0.5kb upstream 0.5kb upstream 5746 true Chr05: 32526411-32532156 Glycine max
Glyma.05G132300 0.5kb upstream 0.5kb upstream 500 false Chr05: 32531657-32532156 Glycine max
Glyma.05G132300 0.5kb downstream 0.5kb downstream 5746 true Chr05: 32525911-32531656 Glycine max
Glyma.05G132300 0.5kb downstream 0.5kb downstream 500 false Chr05: 32525911-32526410 Glycine max
Glyma.05G132300 1.0kb upstream 1.0kb upstream 6246 true Chr05: 32526411-32532656 Glycine max
Glyma.05G132300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32531657-32532656 Glycine max
Glyma.05G132300 1.0kb downstream 1.0kb downstream 6246 true Chr05: 32525411-32531656 Glycine max
Glyma.05G132300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32525411-32526410 Glycine max
Glyma.05G132300 2.0kb upstream 2.0kb upstream 7246 true Chr05: 32526411-32533656 Glycine max
Glyma.05G132300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32531657-32533656 Glycine max
Glyma.05G132300 2.0kb downstream 2.0kb downstream 7246 true Chr05: 32524411-32531656 Glycine max
Glyma.05G132300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32524411-32526410 Glycine max
Glyma.05G132300 5.0kb upstream 5.0kb upstream 10246 true Chr05: 32526411-32536656 Glycine max
Glyma.05G132300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32531657-32536656 Glycine max
Glyma.05G132300 5.0kb downstream 5.0kb downstream 10246 true Chr05: 32521411-32531656 Glycine max
Glyma.05G132300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32521411-32526410 Glycine max
Glyma.05G132300 10.0kb upstream 10.0kb upstream 15246 true Chr05: 32526411-32541656 Glycine max
Glyma.05G132300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32531657-32541656 Glycine max
Glyma.05G132300 10.0kb downstream 10.0kb downstream 15246 true Chr05: 32516411-32531656 Glycine max
Glyma.05G132300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32516411-32526410 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298837 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.42832 0.0 5.16453   High
cufflinks 0.0145621 0.0 0.0688969 Low Low
cufflinks 0.205993 0.0 0.81358    
cufflinks 0.148668 0.0 0.594234 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.105981 0.0 0.429565 Low  
cufflinks 0.0408376 0.0 0.175999 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.189       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain