Gene : Glyma.05G132800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10497 - 60S RIBOSOMAL PROTEIN L27 Genomic Order:  1328
Name:  ? Glyma.05G132800 Secondary Identifier:  ? PAC:30524198
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G132800 0.5kb upstream 0.5kb upstream 2482 true Chr05: 32567152-32569633 Glycine max
Glyma.05G132800 0.5kb upstream 0.5kb upstream 500 false Chr05: 32569134-32569633 Glycine max
Glyma.05G132800 0.5kb downstream 0.5kb downstream 2482 true Chr05: 32566652-32569133 Glycine max
Glyma.05G132800 0.5kb downstream 0.5kb downstream 500 false Chr05: 32566652-32567151 Glycine max
Glyma.05G132800 1.0kb upstream 1.0kb upstream 2982 true Chr05: 32567152-32570133 Glycine max
Glyma.05G132800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32569134-32570133 Glycine max
Glyma.05G132800 1.0kb downstream 1.0kb downstream 2982 true Chr05: 32566152-32569133 Glycine max
Glyma.05G132800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32566152-32567151 Glycine max
Glyma.05G132800 2.0kb upstream 2.0kb upstream 3982 true Chr05: 32567152-32571133 Glycine max
Glyma.05G132800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32569134-32571133 Glycine max
Glyma.05G132800 2.0kb downstream 2.0kb downstream 3982 true Chr05: 32565152-32569133 Glycine max
Glyma.05G132800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32565152-32567151 Glycine max
Glyma.05G132800 5.0kb upstream 5.0kb upstream 6982 true Chr05: 32567152-32574133 Glycine max
Glyma.05G132800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32569134-32574133 Glycine max
Glyma.05G132800 5.0kb downstream 5.0kb downstream 6982 true Chr05: 32562152-32569133 Glycine max
Glyma.05G132800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32562152-32567151 Glycine max
Glyma.05G132800 10.0kb upstream 10.0kb upstream 11982 true Chr05: 32567152-32579133 Glycine max
Glyma.05G132800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32569134-32579133 Glycine max
Glyma.05G132800 10.0kb downstream 10.0kb downstream 11982 true Chr05: 32557152-32569133 Glycine max
Glyma.05G132800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32557152-32567151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299688 5265 Fabidae View MSA
124065262 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.6898 0.0 103.506 High  
cufflinks 61.1588 0.0 176.971 High  
cufflinks 24.4479 0.0 65.5078 High Low
cufflinks 41.3923 0.0 114.663 High  
cufflinks 75.228 0.0 224.933 High High
cufflinks 63.0476 0.0 183.456 High  
cufflinks 75.1059 0.0 224.246 High High
cufflinks 52.7918 0.0 150.06 High  
cufflinks 52.7983 0.0 150.179 High  
cufflinks 32.898     High  
cufflinks 8.94     High Low
cufflinks 23.335     High  
cufflinks 50.775     High High
cufflinks 67.665     High High
cufflinks 9.094     High Low
cufflinks 28.632     High  
cufflinks 17.91     High  
cufflinks 27.7     High  
cufflinks 39.681     High  
cufflinks 22.131     High  
cufflinks 12.983     High  
cufflinks 23.098     High  
cufflinks 30.369     High  
cufflinks 11.284     High Low
cufflinks 23.402     High  
cufflinks 17.541     High  

0 Strain