Gene : Glyma.05G132900 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  1329
Name:  ? Glyma.05G132900 Secondary Identifier:  ? PAC:30523958
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G132900 0.5kb upstream 0.5kb upstream 5936 true Chr05: 32577799-32583734 Glycine max
Glyma.05G132900 0.5kb upstream 0.5kb upstream 500 false Chr05: 32577799-32578298 Glycine max
Glyma.05G132900 0.5kb downstream 0.5kb downstream 5936 true Chr05: 32578299-32584234 Glycine max
Glyma.05G132900 0.5kb downstream 0.5kb downstream 500 false Chr05: 32583735-32584234 Glycine max
Glyma.05G132900 1.0kb upstream 1.0kb upstream 6436 true Chr05: 32577299-32583734 Glycine max
Glyma.05G132900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32577299-32578298 Glycine max
Glyma.05G132900 1.0kb downstream 1.0kb downstream 6436 true Chr05: 32578299-32584734 Glycine max
Glyma.05G132900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32583735-32584734 Glycine max
Glyma.05G132900 2.0kb upstream 2.0kb upstream 7436 true Chr05: 32576299-32583734 Glycine max
Glyma.05G132900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32576299-32578298 Glycine max
Glyma.05G132900 2.0kb downstream 2.0kb downstream 7436 true Chr05: 32578299-32585734 Glycine max
Glyma.05G132900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32583735-32585734 Glycine max
Glyma.05G132900 5.0kb upstream 5.0kb upstream 10436 true Chr05: 32573299-32583734 Glycine max
Glyma.05G132900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32573299-32578298 Glycine max
Glyma.05G132900 5.0kb downstream 5.0kb downstream 10436 true Chr05: 32578299-32588734 Glycine max
Glyma.05G132900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32583735-32588734 Glycine max
Glyma.05G132900 10.0kb upstream 10.0kb upstream 15436 true Chr05: 32568299-32583734 Glycine max
Glyma.05G132900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32568299-32578298 Glycine max
Glyma.05G132900 10.0kb downstream 10.0kb downstream 15436 true Chr05: 32578299-32593734 Glycine max
Glyma.05G132900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32583735-32593734 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311207 5265 Fabidae View MSA
124069200 5270 Rosid View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.08892 0.0 8.7524    
cufflinks 2.07957 0.0 6.20741   Low
cufflinks 3.48192 0.0 9.74298    
cufflinks 12.6433 0.0 33.8938   High
cufflinks 6.98348 0.0 18.7012    
cufflinks 4.65298 0.0 12.7045    
cufflinks 2.08605 0.0 6.20964   Low
cufflinks 15.4241 0.0 41.6978   High
cufflinks 6.15987 0.0 16.5708    
cufflinks 47.686     High High
cufflinks 16.694     High  
cufflinks 5.259        
cufflinks 8.787     High  
cufflinks 3.184        
cufflinks 5.224     High  
cufflinks 2.71        
cufflinks 60.501     High High
cufflinks 6.066        
cufflinks 3.149        
cufflinks 1.59       Low
cufflinks 11.872     High  
cufflinks 1.937       Low
cufflinks 5.267        
cufflinks 11.552     High  
cufflinks 2.46        
cufflinks 19.559     High  

0 Strain