Gene : Glyma.05G150000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11880:SF8 - 37S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL Genomic Order:  1500
Name:  ? Glyma.05G150000 Secondary Identifier:  ? PAC:30524177
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G150000 0.5kb upstream 0.5kb upstream 2894 true Chr05: 34399850-34402743 Glycine max
Glyma.05G150000 0.5kb upstream 0.5kb upstream 500 false Chr05: 34402244-34402743 Glycine max
Glyma.05G150000 0.5kb downstream 0.5kb downstream 2894 true Chr05: 34399350-34402243 Glycine max
Glyma.05G150000 0.5kb downstream 0.5kb downstream 500 false Chr05: 34399350-34399849 Glycine max
Glyma.05G150000 1.0kb upstream 1.0kb upstream 3394 true Chr05: 34399850-34403243 Glycine max
Glyma.05G150000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34402244-34403243 Glycine max
Glyma.05G150000 1.0kb downstream 1.0kb downstream 3394 true Chr05: 34398850-34402243 Glycine max
Glyma.05G150000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34398850-34399849 Glycine max
Glyma.05G150000 2.0kb upstream 2.0kb upstream 4394 true Chr05: 34399850-34404243 Glycine max
Glyma.05G150000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34402244-34404243 Glycine max
Glyma.05G150000 2.0kb downstream 2.0kb downstream 4394 true Chr05: 34397850-34402243 Glycine max
Glyma.05G150000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34397850-34399849 Glycine max
Glyma.05G150000 5.0kb upstream 5.0kb upstream 7394 true Chr05: 34399850-34407243 Glycine max
Glyma.05G150000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34402244-34407243 Glycine max
Glyma.05G150000 5.0kb downstream 5.0kb downstream 7394 true Chr05: 34394850-34402243 Glycine max
Glyma.05G150000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34394850-34399849 Glycine max
Glyma.05G150000 10.0kb upstream 10.0kb upstream 12394 true Chr05: 34399850-34412243 Glycine max
Glyma.05G150000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34402244-34412243 Glycine max
Glyma.05G150000 10.0kb downstream 10.0kb downstream 12394 true Chr05: 34389850-34402243 Glycine max
Glyma.05G150000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34389850-34399849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028835 5273 Angiosperm View MSA
122296812 5265 Fabidae View MSA
124071267 5270 Rosid View MSA
123749976 5271 Pentapetalae View MSA
122796059 5272 Eudicot View MSA
121349820 5274 Embryophyte View MSA
123426657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.7588 0.0 67.491 High  
cufflinks 24.3949 0.0 66.4974 High  
cufflinks 10.0186 0.0 30.0413   Low
cufflinks 22.3106 0.0 61.1649 High  
cufflinks 25.3653 0.0 68.9796 High  
cufflinks 17.9441 0.0 50.1664    
cufflinks 19.7621 0.0 54.7453    
cufflinks 21.9202 0.0 60.0777 High  
cufflinks 20.004 0.0 55.2969 High  
cufflinks 5.465        
cufflinks 2.493       Low
cufflinks 4.518        
cufflinks 6.889        
cufflinks 7.466     High High
cufflinks 2.421       Low
cufflinks 6.319        
cufflinks 2.937       Low
cufflinks 5.472        
cufflinks 5.785        
cufflinks 6.383        
cufflinks 3.174        
cufflinks 6.27        
cufflinks 6.618        
cufflinks 3.177        
cufflinks 6.435        
cufflinks 3.183        

0 Strain