Gene : Glyma.05G147200 G. max Wm82.a2.v1
Defline:  (1 of 9) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  1472
Name:  ? Glyma.05G147200 Secondary Identifier:  ? PAC:30526740
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G147200 0.5kb upstream 0.5kb upstream 2515 true Chr05: 34121151-34123665 Glycine max
Glyma.05G147200 0.5kb upstream 0.5kb upstream 500 false Chr05: 34121151-34121650 Glycine max
Glyma.05G147200 0.5kb downstream 0.5kb downstream 2515 true Chr05: 34121651-34124165 Glycine max
Glyma.05G147200 0.5kb downstream 0.5kb downstream 500 false Chr05: 34123666-34124165 Glycine max
Glyma.05G147200 1.0kb upstream 1.0kb upstream 3015 true Chr05: 34120651-34123665 Glycine max
Glyma.05G147200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34120651-34121650 Glycine max
Glyma.05G147200 1.0kb downstream 1.0kb downstream 3015 true Chr05: 34121651-34124665 Glycine max
Glyma.05G147200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34123666-34124665 Glycine max
Glyma.05G147200 2.0kb upstream 2.0kb upstream 4015 true Chr05: 34119651-34123665 Glycine max
Glyma.05G147200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34119651-34121650 Glycine max
Glyma.05G147200 2.0kb downstream 2.0kb downstream 4015 true Chr05: 34121651-34125665 Glycine max
Glyma.05G147200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34123666-34125665 Glycine max
Glyma.05G147200 5.0kb upstream 5.0kb upstream 7015 true Chr05: 34116651-34123665 Glycine max
Glyma.05G147200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34116651-34121650 Glycine max
Glyma.05G147200 5.0kb downstream 5.0kb downstream 7015 true Chr05: 34121651-34128665 Glycine max
Glyma.05G147200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34123666-34128665 Glycine max
Glyma.05G147200 10.0kb upstream 10.0kb upstream 12015 true Chr05: 34111651-34123665 Glycine max
Glyma.05G147200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34111651-34121650 Glycine max
Glyma.05G147200 10.0kb downstream 10.0kb downstream 12015 true Chr05: 34121651-34133665 Glycine max
Glyma.05G147200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34123666-34133665 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311567 5265 Fabidae View MSA
124068365 5270 Rosid View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.6632 0.0 172.38 High High
cufflinks 23.3499 0.0 62.3039 High  
cufflinks 33.998 0.0 91.2545 High  
cufflinks 6.09165 0.0 17.8667   Low
cufflinks 16.8578 0.0 45.2652    
cufflinks 10.9078 0.0 30.0474    
cufflinks 121.34 0.0 373.313 High High
cufflinks 16.548 0.0 44.46    
cufflinks 6.46912 0.0 18.8283   Low
cufflinks 8.723     High  
cufflinks 0.171       Low
cufflinks 7.166        
cufflinks 4.126        
cufflinks 9.853     High  
cufflinks 0.037     Low Low
cufflinks 5.857        
cufflinks 2.66        
cufflinks 5.796        
cufflinks 11.76     High  
cufflinks 7.236     High  
cufflinks 0.43       Low
cufflinks 10.065     High  
cufflinks 6.678        
cufflinks 0.502        
cufflinks 6.627        
cufflinks 0.67        

0 Strain