Gene : Glyma.05G148200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12612 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  1482
Name:  ? Glyma.05G148200 Secondary Identifier:  ? PAC:30525923
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G148200 0.5kb upstream 0.5kb upstream 3240 true Chr05: 34241957-34245196 Glycine max
Glyma.05G148200 0.5kb upstream 0.5kb upstream 500 false Chr05: 34241957-34242456 Glycine max
Glyma.05G148200 0.5kb downstream 0.5kb downstream 3240 true Chr05: 34242457-34245696 Glycine max
Glyma.05G148200 0.5kb downstream 0.5kb downstream 500 false Chr05: 34245197-34245696 Glycine max
Glyma.05G148200 1.0kb upstream 1.0kb upstream 3740 true Chr05: 34241457-34245196 Glycine max
Glyma.05G148200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34241457-34242456 Glycine max
Glyma.05G148200 1.0kb downstream 1.0kb downstream 3740 true Chr05: 34242457-34246196 Glycine max
Glyma.05G148200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34245197-34246196 Glycine max
Glyma.05G148200 2.0kb upstream 2.0kb upstream 4740 true Chr05: 34240457-34245196 Glycine max
Glyma.05G148200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34240457-34242456 Glycine max
Glyma.05G148200 2.0kb downstream 2.0kb downstream 4740 true Chr05: 34242457-34247196 Glycine max
Glyma.05G148200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34245197-34247196 Glycine max
Glyma.05G148200 5.0kb upstream 5.0kb upstream 7740 true Chr05: 34237457-34245196 Glycine max
Glyma.05G148200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34237457-34242456 Glycine max
Glyma.05G148200 5.0kb downstream 5.0kb downstream 7740 true Chr05: 34242457-34250196 Glycine max
Glyma.05G148200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34245197-34250196 Glycine max
Glyma.05G148200 10.0kb upstream 10.0kb upstream 12740 true Chr05: 34232457-34245196 Glycine max
Glyma.05G148200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34232457-34242456 Glycine max
Glyma.05G148200 10.0kb downstream 10.0kb downstream 12740 true Chr05: 34242457-34255196 Glycine max
Glyma.05G148200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34245197-34255196 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309571 5265 Fabidae View MSA
124073712 5270 Rosid View MSA
123736985 5271 Pentapetalae View MSA
122797054 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.7591 0.0 162.477 High  
cufflinks 90.8449 0.0 247.189 High  
cufflinks 56.6051 0.0 151.125 High Low
cufflinks 67.2536 0.0 180.351 High  
cufflinks 113.412 0.0 315.654 High  
cufflinks 213.086 0.0 641.928 High High
cufflinks 88.4281 0.0 240.501 High  
cufflinks 95.8928 0.0 262.251 High  
cufflinks 85.6701 0.0 232.638 High  
cufflinks 23.591     High High
cufflinks 6.588     High Low
cufflinks 12.599     High  
cufflinks 31.445     High High
cufflinks 40.468     High High
cufflinks 5.275     High Low
cufflinks 14.242     High  
cufflinks 12.293     High  
cufflinks 15.1     High  
cufflinks 21.915     High  
cufflinks 11.5     High  
cufflinks 8.984     High  
cufflinks 12.338     High  
cufflinks 13.907     High  
cufflinks 7.939     High  
cufflinks 11.871     High  
cufflinks 11.552     High  

0 Strain