Gene : Glyma.05G149200 G. max Wm82.a2.v1
Defline:  (1 of 20) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  1492
Name:  ? Glyma.05G149200 Secondary Identifier:  ? PAC:30527515
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G149200 0.5kb upstream 0.5kb upstream 6476 true Chr05: 34347910-34354385 Glycine max
Glyma.05G149200 0.5kb upstream 0.5kb upstream 500 false Chr05: 34353886-34354385 Glycine max
Glyma.05G149200 0.5kb downstream 0.5kb downstream 6476 true Chr05: 34347410-34353885 Glycine max
Glyma.05G149200 0.5kb downstream 0.5kb downstream 500 false Chr05: 34347410-34347909 Glycine max
Glyma.05G149200 1.0kb upstream 1.0kb upstream 6976 true Chr05: 34347910-34354885 Glycine max
Glyma.05G149200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34353886-34354885 Glycine max
Glyma.05G149200 1.0kb downstream 1.0kb downstream 6976 true Chr05: 34346910-34353885 Glycine max
Glyma.05G149200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34346910-34347909 Glycine max
Glyma.05G149200 2.0kb upstream 2.0kb upstream 7976 true Chr05: 34347910-34355885 Glycine max
Glyma.05G149200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34353886-34355885 Glycine max
Glyma.05G149200 2.0kb downstream 2.0kb downstream 7976 true Chr05: 34345910-34353885 Glycine max
Glyma.05G149200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34345910-34347909 Glycine max
Glyma.05G149200 5.0kb upstream 5.0kb upstream 10976 true Chr05: 34347910-34358885 Glycine max
Glyma.05G149200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34353886-34358885 Glycine max
Glyma.05G149200 5.0kb downstream 5.0kb downstream 10976 true Chr05: 34342910-34353885 Glycine max
Glyma.05G149200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34342910-34347909 Glycine max
Glyma.05G149200 10.0kb upstream 10.0kb upstream 15976 true Chr05: 34347910-34363885 Glycine max
Glyma.05G149200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34353886-34363885 Glycine max
Glyma.05G149200 10.0kb downstream 10.0kb downstream 15976 true Chr05: 34337910-34353885 Glycine max
Glyma.05G149200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34337910-34347909 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301501 5265 Fabidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18645 0.0 11.9876    
cufflinks 4.16227 0.0 14.361    
cufflinks 3.46153 0.0 14.5854    
cufflinks 5.4498 0.0 20.4112   High
cufflinks 3.25395 0.0 12.0237    
cufflinks 3.8068 0.0 13.4555    
cufflinks 4.37554 0.0 17.2822    
cufflinks 3.52124 0.0 12.6619    
cufflinks 2.63789 0.0 10.4376   Low
cufflinks 0.714        
cufflinks 1.363       High
cufflinks 0.661        
cufflinks 0.469       Low
cufflinks 0.431       Low
cufflinks 0.47       Low
cufflinks 0.912        
cufflinks 1.085        
cufflinks 1.002        
cufflinks 0.824        
cufflinks 1.011        
cufflinks 1.054        
cufflinks 0.879        
cufflinks 0.637        
cufflinks 0.941        
cufflinks 0.974        
cufflinks 1.13        

0 Strain