Gene : Glyma.05G166300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10903:SF39 - TRANSLOCASE OF CHLOROPLAST 159, CHLOROPLASTIC Genomic Order:  1663
Name:  ? Glyma.05G166300 Secondary Identifier:  ? PAC:30524209
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G166300 0.5kb upstream 0.5kb upstream 4765 true Chr05: 35679639-35684403 Glycine max
Glyma.05G166300 0.5kb upstream 0.5kb upstream 500 false Chr05: 35679639-35680138 Glycine max
Glyma.05G166300 0.5kb downstream 0.5kb downstream 4765 true Chr05: 35680139-35684903 Glycine max
Glyma.05G166300 0.5kb downstream 0.5kb downstream 500 false Chr05: 35684404-35684903 Glycine max
Glyma.05G166300 1.0kb upstream 1.0kb upstream 5265 true Chr05: 35679139-35684403 Glycine max
Glyma.05G166300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35679139-35680138 Glycine max
Glyma.05G166300 1.0kb downstream 1.0kb downstream 5265 true Chr05: 35680139-35685403 Glycine max
Glyma.05G166300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35684404-35685403 Glycine max
Glyma.05G166300 2.0kb upstream 2.0kb upstream 6265 true Chr05: 35678139-35684403 Glycine max
Glyma.05G166300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35678139-35680138 Glycine max
Glyma.05G166300 2.0kb downstream 2.0kb downstream 6265 true Chr05: 35680139-35686403 Glycine max
Glyma.05G166300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35684404-35686403 Glycine max
Glyma.05G166300 5.0kb upstream 5.0kb upstream 9265 true Chr05: 35675139-35684403 Glycine max
Glyma.05G166300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35675139-35680138 Glycine max
Glyma.05G166300 5.0kb downstream 5.0kb downstream 9265 true Chr05: 35680139-35689403 Glycine max
Glyma.05G166300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35684404-35689403 Glycine max
Glyma.05G166300 10.0kb upstream 10.0kb upstream 14265 true Chr05: 35670139-35684403 Glycine max
Glyma.05G166300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35670139-35680138 Glycine max
Glyma.05G166300 10.0kb downstream 10.0kb downstream 14265 true Chr05: 35680139-35694403 Glycine max
Glyma.05G166300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35684404-35694403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309541 5265 Fabidae View MSA
124067138 5270 Rosid View MSA
123750578 5271 Pentapetalae View MSA
122788806 5272 Eudicot View MSA
122047834 5273 Angiosperm View MSA
121348956 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.63125 0.0 25.9615   High
cufflinks 8.39802 0.0 22.4987    
cufflinks 6.00296 0.0 16.0157    
cufflinks 9.47041 0.0 25.4979   High
cufflinks 5.83332 0.0 15.5656    
cufflinks 2.97157 0.0 8.14641   Low
cufflinks 6.08506 0.0 16.2347    
cufflinks 4.13995 0.0 11.1407    
cufflinks 5.10676 0.0 13.6521    
cufflinks 7.635     High  
cufflinks 5.341        
cufflinks 13.819     High  
cufflinks 6.935        
cufflinks 8.724     High  
cufflinks 5.857     High  
cufflinks 27.826     High High
cufflinks 4.815       Low
cufflinks 11.195     High  
cufflinks 14.985     High  
cufflinks 36.442     High High
cufflinks 5.008       Low
cufflinks 30.293     High High
cufflinks 24.548     High High
cufflinks 4.055       Low
cufflinks 33.993     High High
cufflinks 5.396        

0 Strain