Gene : Glyma.05G163800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF134 - TRANSLATION FACTOR Genomic Order:  1638
Name:  ? Glyma.05G163800 Secondary Identifier:  ? PAC:30527564
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G163800 0.5kb upstream 0.5kb upstream 8326 true Chr05: 35490191-35498516 Glycine max
Glyma.05G163800 0.5kb upstream 0.5kb upstream 500 false Chr05: 35490191-35490690 Glycine max
Glyma.05G163800 0.5kb downstream 0.5kb downstream 8326 true Chr05: 35490691-35499016 Glycine max
Glyma.05G163800 0.5kb downstream 0.5kb downstream 500 false Chr05: 35498517-35499016 Glycine max
Glyma.05G163800 1.0kb upstream 1.0kb upstream 8826 true Chr05: 35489691-35498516 Glycine max
Glyma.05G163800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35489691-35490690 Glycine max
Glyma.05G163800 1.0kb downstream 1.0kb downstream 8826 true Chr05: 35490691-35499516 Glycine max
Glyma.05G163800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35498517-35499516 Glycine max
Glyma.05G163800 2.0kb upstream 2.0kb upstream 9826 true Chr05: 35488691-35498516 Glycine max
Glyma.05G163800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35488691-35490690 Glycine max
Glyma.05G163800 2.0kb downstream 2.0kb downstream 9826 true Chr05: 35490691-35500516 Glycine max
Glyma.05G163800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35498517-35500516 Glycine max
Glyma.05G163800 5.0kb upstream 5.0kb upstream 12826 true Chr05: 35485691-35498516 Glycine max
Glyma.05G163800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35485691-35490690 Glycine max
Glyma.05G163800 5.0kb downstream 5.0kb downstream 12826 true Chr05: 35490691-35503516 Glycine max
Glyma.05G163800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35498517-35503516 Glycine max
Glyma.05G163800 10.0kb upstream 10.0kb upstream 17826 true Chr05: 35480691-35498516 Glycine max
Glyma.05G163800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35480691-35490690 Glycine max
Glyma.05G163800 10.0kb downstream 10.0kb downstream 17826 true Chr05: 35490691-35508516 Glycine max
Glyma.05G163800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35498517-35508516 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307258 5265 Fabidae View MSA
124069464 5270 Rosid View MSA
123741967 5271 Pentapetalae View MSA
122794098 5272 Eudicot View MSA
122048612 5273 Angiosperm View MSA
121348366 5274 Embryophyte View MSA
123425757 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.09597 0.0 30.3775   Low
cufflinks 8.0066 0.0 33.185    
cufflinks 8.10223 0.0 33.5177    
cufflinks 10.107 0.0 45.8334   High
cufflinks 8.51263 0.0 32.5282    
cufflinks 8.22134 0.0 34.1313    
cufflinks 11.7477 0.0 48.5374   High
cufflinks 7.94438 0.0 33.2076    
cufflinks 7.3368 0.0 30.5794    
cufflinks 0.529        
cufflinks 0.292       Low
cufflinks 0.548        
cufflinks 0.666       High
cufflinks 0.709       High
cufflinks 0.264       Low
cufflinks 0.422        
cufflinks 0.281       Low
cufflinks 0.594       High
cufflinks 0.58        
cufflinks 0.473        
cufflinks 0.331        
cufflinks 0.458        
cufflinks 0.435        
cufflinks 0.369        
cufflinks 0.437        
cufflinks 0.293       Low

0 Strain