Gene : Glyma.05G160500 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1605
Name:  ? Glyma.05G160500 Secondary Identifier:  ? PAC:30526705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G160500 0.5kb upstream 0.5kb upstream 2248 true Chr05: 35214080-35216327 Glycine max
Glyma.05G160500 0.5kb upstream 0.5kb upstream 500 false Chr05: 35215828-35216327 Glycine max
Glyma.05G160500 0.5kb downstream 0.5kb downstream 2248 true Chr05: 35213580-35215827 Glycine max
Glyma.05G160500 0.5kb downstream 0.5kb downstream 500 false Chr05: 35213580-35214079 Glycine max
Glyma.05G160500 1.0kb upstream 1.0kb upstream 2748 true Chr05: 35214080-35216827 Glycine max
Glyma.05G160500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35215828-35216827 Glycine max
Glyma.05G160500 1.0kb downstream 1.0kb downstream 2748 true Chr05: 35213080-35215827 Glycine max
Glyma.05G160500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35213080-35214079 Glycine max
Glyma.05G160500 2.0kb upstream 2.0kb upstream 3748 true Chr05: 35214080-35217827 Glycine max
Glyma.05G160500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35215828-35217827 Glycine max
Glyma.05G160500 2.0kb downstream 2.0kb downstream 3748 true Chr05: 35212080-35215827 Glycine max
Glyma.05G160500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35212080-35214079 Glycine max
Glyma.05G160500 5.0kb upstream 5.0kb upstream 6748 true Chr05: 35214080-35220827 Glycine max
Glyma.05G160500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35215828-35220827 Glycine max
Glyma.05G160500 5.0kb downstream 5.0kb downstream 6748 true Chr05: 35209080-35215827 Glycine max
Glyma.05G160500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35209080-35214079 Glycine max
Glyma.05G160500 10.0kb upstream 10.0kb upstream 11748 true Chr05: 35214080-35225827 Glycine max
Glyma.05G160500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35215828-35225827 Glycine max
Glyma.05G160500 10.0kb downstream 10.0kb downstream 11748 true Chr05: 35204080-35215827 Glycine max
Glyma.05G160500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35204080-35214079 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309293 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0325 0.0 9.98592    
cufflinks 2.53124 0.0 8.50198    
cufflinks 4.85149 0.0 14.8606   High
cufflinks 2.42085 0.0 8.15254    
cufflinks 2.28327 0.0 7.79078    
cufflinks 2.8379 0.0 9.42506    
cufflinks 0.627403 0.0 2.34199   Low
cufflinks 4.23185 0.0 13.2009    
cufflinks 2.19957 0.0 7.51601    
cufflinks 18.255     High High
cufflinks 6.734     High  
cufflinks 5.196        
cufflinks 4.65        
cufflinks 1.387       Low
cufflinks 27.416     High High
cufflinks 4.32        
cufflinks 29.202     High High
cufflinks 5.06        
cufflinks 1.894       Low
cufflinks 3.201        
cufflinks 2.615        
cufflinks 3.815        
cufflinks 4.183        
cufflinks 6.494     High  
cufflinks 2.454        
cufflinks 3.868        

0 Strain