Gene : Glyma.05G161000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13194:SF19 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  1610
Name:  ? Glyma.05G161000 Secondary Identifier:  ? PAC:30524201
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G161000 0.5kb upstream 0.5kb upstream 7440 true Chr05: 35267584-35275023 Glycine max
Glyma.05G161000 0.5kb upstream 0.5kb upstream 500 false Chr05: 35274524-35275023 Glycine max
Glyma.05G161000 0.5kb downstream 0.5kb downstream 7440 true Chr05: 35267084-35274523 Glycine max
Glyma.05G161000 0.5kb downstream 0.5kb downstream 500 false Chr05: 35267084-35267583 Glycine max
Glyma.05G161000 1.0kb upstream 1.0kb upstream 7940 true Chr05: 35267584-35275523 Glycine max
Glyma.05G161000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35274524-35275523 Glycine max
Glyma.05G161000 1.0kb downstream 1.0kb downstream 7940 true Chr05: 35266584-35274523 Glycine max
Glyma.05G161000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35266584-35267583 Glycine max
Glyma.05G161000 2.0kb upstream 2.0kb upstream 8940 true Chr05: 35267584-35276523 Glycine max
Glyma.05G161000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35274524-35276523 Glycine max
Glyma.05G161000 2.0kb downstream 2.0kb downstream 8940 true Chr05: 35265584-35274523 Glycine max
Glyma.05G161000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35265584-35267583 Glycine max
Glyma.05G161000 5.0kb upstream 5.0kb upstream 11940 true Chr05: 35267584-35279523 Glycine max
Glyma.05G161000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35274524-35279523 Glycine max
Glyma.05G161000 5.0kb downstream 5.0kb downstream 11940 true Chr05: 35262584-35274523 Glycine max
Glyma.05G161000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35262584-35267583 Glycine max
Glyma.05G161000 10.0kb upstream 10.0kb upstream 16940 true Chr05: 35267584-35284523 Glycine max
Glyma.05G161000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35274524-35284523 Glycine max
Glyma.05G161000 10.0kb downstream 10.0kb downstream 16940 true Chr05: 35257584-35274523 Glycine max
Glyma.05G161000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35257584-35267583 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040923 5273 Angiosperm View MSA
122304182 5265 Fabidae View MSA
124064196 5270 Rosid View MSA
123740948 5271 Pentapetalae View MSA
122786384 5272 Eudicot View MSA
121343830 5274 Embryophyte View MSA
123425618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.2206 0.0 175.457 High High
cufflinks 13.9908 0.0 78.7892    
cufflinks 37.9355 0.0 217.262 High High
cufflinks 15.492 0.0 69.715    
cufflinks 1.96337 0.0 11.3965   Low
cufflinks 7.45329 0.0 34.2246    
cufflinks 11.7952 0.0 60.2504    
cufflinks 14.7712 0.0 76.5862    
cufflinks 2.05531 0.0 10.155   Low
cufflinks 0.699        
cufflinks 0.062       Low
cufflinks 1.436        
cufflinks 0.098        
cufflinks 0.084       Low
cufflinks 0.079       Low
cufflinks 1.587        
cufflinks 0.087        
cufflinks 1.006        
cufflinks 0.792        
cufflinks 2.267       High
cufflinks 0.089        
cufflinks 2.25       High
cufflinks 1.763       High
cufflinks 0.104        
cufflinks 2.07       High
cufflinks 0.079       Low

0 Strain