Gene : Glyma.05G158300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12902 - WASP-1 Genomic Order:  1583
Name:  ? Glyma.05G158300 Secondary Identifier:  ? PAC:30527658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G158300 0.5kb upstream 0.5kb upstream 8711 true Chr05: 35038288-35046998 Glycine max
Glyma.05G158300 0.5kb upstream 0.5kb upstream 500 false Chr05: 35046499-35046998 Glycine max
Glyma.05G158300 0.5kb downstream 0.5kb downstream 8711 true Chr05: 35037788-35046498 Glycine max
Glyma.05G158300 0.5kb downstream 0.5kb downstream 500 false Chr05: 35037788-35038287 Glycine max
Glyma.05G158300 1.0kb upstream 1.0kb upstream 9211 true Chr05: 35038288-35047498 Glycine max
Glyma.05G158300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35046499-35047498 Glycine max
Glyma.05G158300 1.0kb downstream 1.0kb downstream 9211 true Chr05: 35037288-35046498 Glycine max
Glyma.05G158300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35037288-35038287 Glycine max
Glyma.05G158300 2.0kb upstream 2.0kb upstream 10211 true Chr05: 35038288-35048498 Glycine max
Glyma.05G158300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35046499-35048498 Glycine max
Glyma.05G158300 2.0kb downstream 2.0kb downstream 10211 true Chr05: 35036288-35046498 Glycine max
Glyma.05G158300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35036288-35038287 Glycine max
Glyma.05G158300 5.0kb upstream 5.0kb upstream 13211 true Chr05: 35038288-35051498 Glycine max
Glyma.05G158300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35046499-35051498 Glycine max
Glyma.05G158300 5.0kb downstream 5.0kb downstream 13211 true Chr05: 35033288-35046498 Glycine max
Glyma.05G158300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35033288-35038287 Glycine max
Glyma.05G158300 10.0kb upstream 10.0kb upstream 18211 true Chr05: 35038288-35056498 Glycine max
Glyma.05G158300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35046499-35056498 Glycine max
Glyma.05G158300 10.0kb downstream 10.0kb downstream 18211 true Chr05: 35028288-35046498 Glycine max
Glyma.05G158300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35028288-35038287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313768 5265 Fabidae View MSA
124060592 5270 Rosid View MSA
123744362 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.81403 0.0 20.2351   High
cufflinks 5.90599 0.0 17.6482    
cufflinks 5.55992 0.0 16.4708    
cufflinks 6.19435 0.0 18.3903    
cufflinks 4.53991 0.0 13.7152   Low
cufflinks 5.51961 0.0 16.4626    
cufflinks 5.06005 0.0 15.2353    
cufflinks 5.31648 0.0 15.919    
cufflinks 5.33204 0.0 15.9838    
cufflinks 3.295        
cufflinks 4.079        
cufflinks 4.232        
cufflinks 4.54        
cufflinks 3.76        
cufflinks 5.815     High  
cufflinks 6.799        
cufflinks 2.037       Low
cufflinks 5.789        
cufflinks 4.543        
cufflinks 9.007     High High
cufflinks 3.426        
cufflinks 8.029     High High
cufflinks 3.956        
cufflinks 3.706        
cufflinks 8.168     High High
cufflinks 2.621       Low

0 Strain