Gene : Glyma.05G175800 G. max Wm82.a2.v1
Genomic Order:  1758 Name:  ? Glyma.05G175800
Secondary Identifier:  ? PAC:30527532
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G175800 0.5kb upstream 0.5kb upstream 1209 true Chr05: 36483783-36484991 Glycine max
Glyma.05G175800 0.5kb upstream 0.5kb upstream 500 false Chr05: 36483783-36484282 Glycine max
Glyma.05G175800 0.5kb downstream 0.5kb downstream 1209 true Chr05: 36484283-36485491 Glycine max
Glyma.05G175800 0.5kb downstream 0.5kb downstream 500 false Chr05: 36484992-36485491 Glycine max
Glyma.05G175800 1.0kb upstream 1.0kb upstream 1709 true Chr05: 36483283-36484991 Glycine max
Glyma.05G175800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36483283-36484282 Glycine max
Glyma.05G175800 1.0kb downstream 1.0kb downstream 1709 true Chr05: 36484283-36485991 Glycine max
Glyma.05G175800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36484992-36485991 Glycine max
Glyma.05G175800 2.0kb upstream 2.0kb upstream 2709 true Chr05: 36482283-36484991 Glycine max
Glyma.05G175800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36482283-36484282 Glycine max
Glyma.05G175800 2.0kb downstream 2.0kb downstream 2709 true Chr05: 36484283-36486991 Glycine max
Glyma.05G175800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36484992-36486991 Glycine max
Glyma.05G175800 5.0kb upstream 5.0kb upstream 5709 true Chr05: 36479283-36484991 Glycine max
Glyma.05G175800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36479283-36484282 Glycine max
Glyma.05G175800 5.0kb downstream 5.0kb downstream 5709 true Chr05: 36484283-36489991 Glycine max
Glyma.05G175800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36484992-36489991 Glycine max
Glyma.05G175800 10.0kb upstream 10.0kb upstream 10709 true Chr05: 36474283-36484991 Glycine max
Glyma.05G175800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36474283-36484282 Glycine max
Glyma.05G175800 10.0kb downstream 10.0kb downstream 10709 true Chr05: 36484283-36494991 Glycine max
Glyma.05G175800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36484992-36494991 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297709 5265 Fabidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7708 0.0 40.2341   High
cufflinks 0.17432 0.0 0.703856 Low Low
cufflinks 0.480498 0.0 1.86431    
cufflinks 0.565358 0.0 2.18174    
cufflinks 3.36113 0.0 11.7817    
cufflinks 14.1547 0.0 41.2539   High
cufflinks 0.157015 0.0 0.636918 Low Low
cufflinks 0.384846 0.0 1.50761    
cufflinks 1.74139 0.0 6.371    
cufflinks 2.066        
cufflinks 37.593     High High
cufflinks 3.257        
cufflinks 5.724        
cufflinks 1.098        
cufflinks 6.069     High  
cufflinks 1.247        
cufflinks 7.271     High  
cufflinks 4.068        
cufflinks 0.258       Low
cufflinks 0.587       Low
cufflinks 5.133        
cufflinks 1.777        
cufflinks 1.385        
cufflinks 47.385     High High
cufflinks 0.415       Low
cufflinks 15.536     High High

0 Strain