Gene : Glyma.05G178000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10916 - 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29 Genomic Order:  1780
Name:  ? Glyma.05G178000 Secondary Identifier:  ? PAC:30523908
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G178000 0.5kb upstream 0.5kb upstream 3449 true Chr05: 36623493-36626941 Glycine max
Glyma.05G178000 0.5kb upstream 0.5kb upstream 500 false Chr05: 36626442-36626941 Glycine max
Glyma.05G178000 0.5kb downstream 0.5kb downstream 3449 true Chr05: 36622993-36626441 Glycine max
Glyma.05G178000 0.5kb downstream 0.5kb downstream 500 false Chr05: 36622993-36623492 Glycine max
Glyma.05G178000 1.0kb upstream 1.0kb upstream 3949 true Chr05: 36623493-36627441 Glycine max
Glyma.05G178000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36626442-36627441 Glycine max
Glyma.05G178000 1.0kb downstream 1.0kb downstream 3949 true Chr05: 36622493-36626441 Glycine max
Glyma.05G178000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36622493-36623492 Glycine max
Glyma.05G178000 2.0kb upstream 2.0kb upstream 4949 true Chr05: 36623493-36628441 Glycine max
Glyma.05G178000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36626442-36628441 Glycine max
Glyma.05G178000 2.0kb downstream 2.0kb downstream 4949 true Chr05: 36621493-36626441 Glycine max
Glyma.05G178000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36621493-36623492 Glycine max
Glyma.05G178000 5.0kb upstream 5.0kb upstream 7949 true Chr05: 36623493-36631441 Glycine max
Glyma.05G178000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36626442-36631441 Glycine max
Glyma.05G178000 5.0kb downstream 5.0kb downstream 7949 true Chr05: 36618493-36626441 Glycine max
Glyma.05G178000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36618493-36623492 Glycine max
Glyma.05G178000 10.0kb upstream 10.0kb upstream 12949 true Chr05: 36623493-36636441 Glycine max
Glyma.05G178000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36626442-36636441 Glycine max
Glyma.05G178000 10.0kb downstream 10.0kb downstream 12949 true Chr05: 36613493-36626441 Glycine max
Glyma.05G178000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36613493-36623492 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306285 5265 Fabidae View MSA
124061844 5270 Rosid View MSA
123736935 5271 Pentapetalae View MSA
122791813 5272 Eudicot View MSA
122048296 5273 Angiosperm View MSA
121344034 5274 Embryophyte View MSA
123424171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.0302 0.0 88.3205 High High
cufflinks 43.6628 0.0 116.51 High High
cufflinks 9.19102 0.0 27.3619    
cufflinks 15.6014 0.0 43.5724    
cufflinks 9.97198 0.0 29.2916    
cufflinks 10.8854 0.0 31.6676    
cufflinks 23.4298 0.0 63.4735 High  
cufflinks 14.9715 0.0 42.0019    
cufflinks 6.71775 0.0 20.8722   Low
cufflinks 4.421        
cufflinks 0.265       Low
cufflinks 3.744        
cufflinks 1.449        
cufflinks 1.845        
cufflinks 0.303       Low
cufflinks 29.053     High High
cufflinks 0.658        
cufflinks 4.169        
cufflinks 6.894        
cufflinks 25.768     High High
cufflinks 0.455       Low
cufflinks 24.222     High High
cufflinks 25.904     High High
cufflinks 0.484       Low
cufflinks 26.781     High High
cufflinks 0.564        

0 Strain