Gene : Glyma.05G178300 G. max Wm82.a2.v1
Defline:  (1 of 9) KOG0094 - GTPase Rab6/YPT6/Ryh1, small G protein superfamily Genomic Order:  1783
Name:  ? Glyma.05G178300 Secondary Identifier:  ? PAC:30527252
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G178300 0.5kb upstream 0.5kb upstream 3599 true Chr05: 36651081-36654679 Glycine max
Glyma.05G178300 0.5kb upstream 0.5kb upstream 500 false Chr05: 36654180-36654679 Glycine max
Glyma.05G178300 0.5kb downstream 0.5kb downstream 3599 true Chr05: 36650581-36654179 Glycine max
Glyma.05G178300 0.5kb downstream 0.5kb downstream 500 false Chr05: 36650581-36651080 Glycine max
Glyma.05G178300 1.0kb upstream 1.0kb upstream 4099 true Chr05: 36651081-36655179 Glycine max
Glyma.05G178300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36654180-36655179 Glycine max
Glyma.05G178300 1.0kb downstream 1.0kb downstream 4099 true Chr05: 36650081-36654179 Glycine max
Glyma.05G178300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36650081-36651080 Glycine max
Glyma.05G178300 2.0kb upstream 2.0kb upstream 5099 true Chr05: 36651081-36656179 Glycine max
Glyma.05G178300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36654180-36656179 Glycine max
Glyma.05G178300 2.0kb downstream 2.0kb downstream 5099 true Chr05: 36649081-36654179 Glycine max
Glyma.05G178300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36649081-36651080 Glycine max
Glyma.05G178300 5.0kb upstream 5.0kb upstream 8099 true Chr05: 36651081-36659179 Glycine max
Glyma.05G178300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36654180-36659179 Glycine max
Glyma.05G178300 5.0kb downstream 5.0kb downstream 8099 true Chr05: 36646081-36654179 Glycine max
Glyma.05G178300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36646081-36651080 Glycine max
Glyma.05G178300 10.0kb upstream 10.0kb upstream 13099 true Chr05: 36651081-36664179 Glycine max
Glyma.05G178300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36654180-36664179 Glycine max
Glyma.05G178300 10.0kb downstream 10.0kb downstream 13099 true Chr05: 36641081-36654179 Glycine max
Glyma.05G178300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36641081-36651080 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301506 5265 Fabidae View MSA
124060621 5270 Rosid View MSA
123736861 5271 Pentapetalae View MSA
122786140 5272 Eudicot View MSA
122049547 5273 Angiosperm View MSA
121350037 5274 Embryophyte View MSA
123428203 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0449909 0.0 0.190902 Low Low
cufflinks 0.64954 0.0 2.43428    
cufflinks 2.27244 0.0 7.83431    
cufflinks 0.824039 0.0 3.05012    
cufflinks 2.039 0.0 7.11277    
cufflinks 4.59028 0.0 14.5176    
cufflinks 4.30613 0.0 13.7417    
cufflinks 1.53953 0.0 5.49055    
cufflinks 1.03142 0.0 3.77632    
cufflinks 1.558       High
cufflinks 0.784        
cufflinks 0.77        
cufflinks 0.745        
cufflinks 1.09        
cufflinks 0.598        
cufflinks 0.114       Low
cufflinks 0.95        
cufflinks 2.004       High
cufflinks 0.384        
cufflinks 0.057     Low Low
cufflinks 0.448        
cufflinks 0.098       Low
cufflinks 0.273        
cufflinks 0.676        
cufflinks 0.093     Low Low
cufflinks 0.71        

0 Strain